Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.85■□□□□ 0.61
Tcof1O08784 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.85■□□□□ 0.61
Tcof1O08784 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tcof1O08784 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcof1O08784 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcof1O08784 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tcof1O08784 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcof1O08784 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcof1O08784 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Tcof1O08784 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.84■□□□□ 0.61
Tcof1O08784 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.84■□□□□ 0.61
Tcof1O08784 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tcof1O08784 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Tcof1O08784 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tcof1O08784 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcof1O08784 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcof1O08784 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tcof1O08784 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tcof1O08784 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tcof1O08784 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tcof1O08784 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tcof1O08784 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tcof1O08784 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tcof1O08784 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tcof1O08784 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tcof1O08784 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tcof1O08784 Mir8098-201ENSMUST00000184011 137 ntBASIC18.83■□□□□ 0.61
Tcof1O08784 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.83■□□□□ 0.61
Tcof1O08784 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.83■□□□□ 0.61
Tcof1O08784 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.83■□□□□ 0.61
Tcof1O08784 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Tcof1O08784 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tcof1O08784 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tcof1O08784 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tcof1O08784 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Gm13884-201ENSMUST00000118103 829 ntBASIC18.82■□□□□ 0.6
Tcof1O08784 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcof1O08784 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tcof1O08784 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.81■□□□□ 0.6
Tcof1O08784 Gm25745-201ENSMUST00000174945 133 ntBASIC18.81■□□□□ 0.6
Tcof1O08784 Gm5864-201ENSMUST00000202263 970 ntBASIC18.81■□□□□ 0.6
Tcof1O08784 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.81■□□□□ 0.6
Tcof1O08784 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.81■□□□□ 0.6
Tcof1O08784 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tcof1O08784 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcof1O08784 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Tcof1O08784 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.8■□□□□ 0.6
Tcof1O08784 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 Gm43514-201ENSMUST00000198852 424 ntBASIC18.8■□□□□ 0.6
Tcof1O08784 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.8■□□□□ 0.6
Tcof1O08784 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.8■□□□□ 0.6
Tcof1O08784 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.8■□□□□ 0.6
Tcof1O08784 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.8■□□□□ 0.6
Tcof1O08784 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.8■□□□□ 0.6
Tcof1O08784 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.8■□□□□ 0.6
Tcof1O08784 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms