Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.39■□□□□ 0.05
Sh3yl1O08641 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3yl1O08641 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.38■□□□□ 0.05
Sh3yl1O08641 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3yl1O08641 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.38■□□□□ 0.05
Sh3yl1O08641 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3yl1O08641 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.36■□□□□ 0.05
Sh3yl1O08641 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.36■□□□□ 0.05
Sh3yl1O08641 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3yl1O08641 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms