Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gm18421-201ENSMUST00000204122 625 ntBASIC17.29■□□□□ 0.36
Usp35M0QWN7 Mzt1-203ENSMUST00000227948 952 ntBASIC17.29■□□□□ 0.36
Usp35M0QWN7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp35M0QWN7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Gm28659-201ENSMUST00000188013 759 ntBASIC17.28■□□□□ 0.36
Usp35M0QWN7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.28■□□□□ 0.36
Usp35M0QWN7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp35M0QWN7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp35M0QWN7 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.27■□□□□ 0.36
Usp35M0QWN7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.27■□□□□ 0.36
Usp35M0QWN7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp35M0QWN7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.27■□□□□ 0.35
Usp35M0QWN7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp35M0QWN7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp35M0QWN7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Gm25925-201ENSMUST00000158314 306 ntBASIC17.26■□□□□ 0.35
Usp35M0QWN7 Gm43347-201ENSMUST00000200226 580 ntBASIC17.26■□□□□ 0.35
Usp35M0QWN7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.26■□□□□ 0.35
Usp35M0QWN7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp35M0QWN7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Gm15372-201ENSMUST00000120729 834 ntBASIC17.25■□□□□ 0.35
Usp35M0QWN7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp35M0QWN7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms