Protein–RNA interactions for Protein: J3QP38

Gm21900, Predicted gene, 21900, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21900J3QP38 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm21900J3QP38 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm21900J3QP38 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm21900J3QP38 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm21900J3QP38 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm21900J3QP38 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm21900J3QP38 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm21900J3QP38 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm21900J3QP38 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm21900J3QP38 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.52□□□□□ -0.4
Gm21900J3QP38 Sybu-209ENSMUST00000228639 4113 ntBASIC12.52□□□□□ -0.4
Gm21900J3QP38 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Gm21900J3QP38 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm21900J3QP38 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm21900J3QP38 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.52□□□□□ -0.4
Gm21900J3QP38 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm21900J3QP38 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gm21900J3QP38 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm21900J3QP38 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.52□□□□□ -0.4
Gm21900J3QP38 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm21900J3QP38 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm21900J3QP38 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm21900J3QP38 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Gm11249-201ENSMUST00000117071 859 ntBASIC12.52□□□□□ -0.41
Gm21900J3QP38 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Gm18958-201ENSMUST00000174258 762 ntBASIC12.52□□□□□ -0.41
Gm21900J3QP38 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm21900J3QP38 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Gm10849-201ENSMUST00000100397 618 ntBASIC12.51□□□□□ -0.41
Gm21900J3QP38 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.51□□□□□ -0.41
Gm21900J3QP38 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm21900J3QP38 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm21900J3QP38 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms