Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh11xF6ZNL5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh11xF6ZNL5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh11xF6ZNL5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh11xF6ZNL5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcdh11xF6ZNL5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh11xF6ZNL5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh11xF6ZNL5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh11xF6ZNL5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdh11xF6ZNL5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdh11xF6ZNL5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh11xF6ZNL5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh11xF6ZNL5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Gm27741-201ENSMUST00000185060 237 ntBASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh11xF6ZNL5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Gm17807-201ENSMUST00000186869 298 ntBASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Gm45328-201ENSMUST00000210942 917 ntBASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh11xF6ZNL5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms