Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scaf11E9PZM7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scaf11E9PZM7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Scaf11E9PZM7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scaf11E9PZM7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scaf11E9PZM7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC22.37■■□□□ 1.17
Scaf11E9PZM7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Scaf11E9PZM7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scaf11E9PZM7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Scaf11E9PZM7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Gm6598-201ENSMUST00000202719 2615 ntBASIC22.36■■□□□ 1.17
Scaf11E9PZM7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scaf11E9PZM7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Scaf11E9PZM7 Gm22065-201ENSMUST00000103753 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm22066-201ENSMUST00000103761 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm24932-201ENSMUST00000103763 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm24115-201ENSMUST00000103799 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm22190-201ENSMUST00000103827 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm22191-201ENSMUST00000103831 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm24721-201ENSMUST00000103849 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm28018-201ENSMUST00000103869 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm26399-201ENSMUST00000103937 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm18489-201ENSMUST00000172565 551 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm25349-201ENSMUST00000177728 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm23616-201ENSMUST00000177797 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm25871-201ENSMUST00000177816 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm24752-201ENSMUST00000178240 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm24496-201ENSMUST00000178287 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm25649-201ENSMUST00000178476 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm25548-201ENSMUST00000178681 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm23147-201ENSMUST00000178841 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm26095-201ENSMUST00000179270 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm22171-201ENSMUST00000179283 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm23936-201ENSMUST00000179354 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm22619-201ENSMUST00000179516 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm25255-201ENSMUST00000179579 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm24755-201ENSMUST00000179691 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm26506-201ENSMUST00000179692 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm25086-201ENSMUST00000179931 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm23243-201ENSMUST00000180047 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm24659-201ENSMUST00000180212 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm24169-201ENSMUST00000180244 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm23689-201ENSMUST00000180354 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm27359-201ENSMUST00000184153 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm27785-201ENSMUST00000184268 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm27466-201ENSMUST00000184396 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm27703-201ENSMUST00000184836 110 ntBASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Scaf11E9PZM7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scaf11E9PZM7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms