Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.13□□□□□ -0.47
Gm5878E9PUB3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Gm27389-201ENSMUST00000183622 195 ntBASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Gm18959-201ENSMUST00000208954 655 ntBASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm5878E9PUB3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Asic1-205ENSMUST00000228185 1818 ntBASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Gm27011-201ENSMUST00000182352 972 ntBASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Gm36991-201ENSMUST00000191800 648 ntBASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5878E9PUB3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5878E9PUB3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms