Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Hfm1D3Z4R1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hfm1D3Z4R1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hfm1D3Z4R1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC22.51■■□□□ 1.19
Hfm1D3Z4R1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Hfm1D3Z4R1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Hfm1D3Z4R1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC22.49■■□□□ 1.19
Hfm1D3Z4R1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Mir449b-201ENSMUST00000104833 80 ntBASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hfm1D3Z4R1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm22065-201ENSMUST00000103753 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm22066-201ENSMUST00000103761 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm24932-201ENSMUST00000103763 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm24115-201ENSMUST00000103799 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm22190-201ENSMUST00000103827 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm22191-201ENSMUST00000103831 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm24721-201ENSMUST00000103849 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm28018-201ENSMUST00000103869 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm26399-201ENSMUST00000103937 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm25349-201ENSMUST00000177728 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm23616-201ENSMUST00000177797 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm25871-201ENSMUST00000177816 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm24752-201ENSMUST00000178240 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm24496-201ENSMUST00000178287 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm25649-201ENSMUST00000178476 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm25548-201ENSMUST00000178681 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm23147-201ENSMUST00000178841 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm26095-201ENSMUST00000179270 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm22171-201ENSMUST00000179283 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm23936-201ENSMUST00000179354 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm22619-201ENSMUST00000179516 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm25255-201ENSMUST00000179579 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm24755-201ENSMUST00000179691 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm26506-201ENSMUST00000179692 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm25086-201ENSMUST00000179931 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm23243-201ENSMUST00000180047 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm24659-201ENSMUST00000180212 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm24169-201ENSMUST00000180244 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm23689-201ENSMUST00000180354 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm27359-201ENSMUST00000184153 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm27785-201ENSMUST00000184268 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm27466-201ENSMUST00000184396 110 ntBASIC22.47■■□□□ 1.19
Hfm1D3Z4R1 Gm27703-201ENSMUST00000184836 110 ntBASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms