Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.55□□□□□ -0.24
Col6a4A2AX52 Gm11764-201ENSMUST00000120221 623 ntBASIC13.55□□□□□ -0.24
Col6a4A2AX52 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.55□□□□□ -0.24
Col6a4A2AX52 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.55□□□□□ -0.24
Col6a4A2AX52 AA543401-201ENSMUST00000164248 1269 ntBASIC13.55□□□□□ -0.24
Col6a4A2AX52 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.55□□□□□ -0.24
Col6a4A2AX52 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.54□□□□□ -0.24
Col6a4A2AX52 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.54□□□□□ -0.24
Col6a4A2AX52 Gm25406-201ENSMUST00000157599 105 ntBASIC13.53□□□□□ -0.24
Col6a4A2AX52 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Col6a4A2AX52 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.53□□□□□ -0.24
Col6a4A2AX52 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Col6a4A2AX52 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a4A2AX52 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.52□□□□□ -0.24
Col6a4A2AX52 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a4A2AX52 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a4A2AX52 Gm27646-201ENSMUST00000183989 110 ntBASIC13.52□□□□□ -0.24
Col6a4A2AX52 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a4A2AX52 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a4A2AX52 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a4A2AX52 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a4A2AX52 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a4A2AX52 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a4A2AX52 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a4A2AX52 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms