Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gm45059-201ENSMUST00000205558 1077 ntBASIC25.32■■□□□ 1.64
Shroom2A2ALU4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shroom2A2ALU4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shroom2A2ALU4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Shroom2A2ALU4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC25.32■■□□□ 1.64
Shroom2A2ALU4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Shroom2A2ALU4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Shroom2A2ALU4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Shroom2A2ALU4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Shroom2A2ALU4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC25.31■■□□□ 1.64
Shroom2A2ALU4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC25.31■■□□□ 1.64
Shroom2A2ALU4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Shroom2A2ALU4 Gm27680-201ENSMUST00000184192 160 ntBASIC25.31■■□□□ 1.64
Shroom2A2ALU4 Gm6266-201ENSMUST00000203844 806 ntBASIC25.31■■□□□ 1.64
Shroom2A2ALU4 AC107711.5-202ENSMUST00000226429 702 ntBASIC25.31■■□□□ 1.64
Shroom2A2ALU4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Shroom2A2ALU4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Gm9063-201ENSMUST00000223299 582 ntBASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Shroom2A2ALU4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 Gm15321-201ENSMUST00000121290 288 ntBASIC25.29■■□□□ 1.64
Shroom2A2ALU4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom2A2ALU4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Gm16198-201ENSMUST00000118766 670 ntBASIC25.28■■□□□ 1.64
Shroom2A2ALU4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Gm12017-201ENSMUST00000122453 1003 ntBASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Gm24694-201ENSMUST00000180054 110 ntBASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Gm27663-201ENSMUST00000184839 110 ntBASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Gm13410-201ENSMUST00000117058 1415 ntBASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 AC166341.4-201ENSMUST00000220625 123 ntBASIC25.28■■□□□ 1.64
Shroom2A2ALU4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Shroom2A2ALU4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Shroom2A2ALU4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Shroom2A2ALU4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Shroom2A2ALU4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Shroom2A2ALU4 Gm27838-201ENSMUST00000184829 128 ntBASIC25.27■■□□□ 1.64
Shroom2A2ALU4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Shroom2A2ALU4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Shroom2A2ALU4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Shroom2A2ALU4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC25.26■■□□□ 1.63
Shroom2A2ALU4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Shroom2A2ALU4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC25.26■■□□□ 1.63
Shroom2A2ALU4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC25.26■■□□□ 1.63
Shroom2A2ALU4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Shroom2A2ALU4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Gm45331-201ENSMUST00000209868 554 ntBASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Gm43182-201ENSMUST00000199476 2528 ntBASIC25.25■■□□□ 1.63
Shroom2A2ALU4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom2A2ALU4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Gm23984-201ENSMUST00000157139 203 ntBASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Mir3547-201ENSMUST00000175461 88 ntBASIC25.24■■□□□ 1.63
Shroom2A2ALU4 CT030684.1-201ENSMUST00000227292 914 ntBASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms