Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.22■□□□□ 0.03
Slc9a6A1L3P4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Gm11355-201ENSMUST00000121120 306 ntBASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Gm37722-201ENSMUST00000193757 208 ntBASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Gm18032-201ENSMUST00000222541 538 ntBASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc9a6A1L3P4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Slc9a6A1L3P4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc9a6A1L3P4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc9a6A1L3P4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc9a6A1L3P4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Slc9a6A1L3P4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc9a6A1L3P4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Gm10013-201ENSMUST00000106074 672 ntBASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Gm10231-201ENSMUST00000181584 441 ntBASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Gm10175-202ENSMUST00000208752 441 ntBASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc9a6A1L3P4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc9a6A1L3P4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms