Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
IsxA1A546 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.06■□□□□ 0
IsxA1A546 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.06■□□□□ 0
IsxA1A546 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.06■□□□□ 0
IsxA1A546 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
IsxA1A546 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.05■□□□□ 0
IsxA1A546 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IsxA1A546 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IsxA1A546 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IsxA1A546 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IsxA1A546 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
IsxA1A546 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
IsxA1A546 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IsxA1A546 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.05■□□□□ -0
IsxA1A546 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.05■□□□□ -0
IsxA1A546 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
IsxA1A546 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.05■□□□□ -0
IsxA1A546 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
IsxA1A546 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
IsxA1A546 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.05■□□□□ -0
IsxA1A546 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.05■□□□□ -0
IsxA1A546 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IsxA1A546 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.05■□□□□ -0
IsxA1A546 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IsxA1A546 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.05■□□□□ -0
IsxA1A546 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.05■□□□□ -0
IsxA1A546 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IsxA1A546 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IsxA1A546 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IsxA1A546 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
IsxA1A546 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.04■□□□□ -0
IsxA1A546 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Mir6349-201ENSMUST00000184059 97 ntBASIC15.04■□□□□ -0
IsxA1A546 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
IsxA1A546 Mtag2-201ENSMUST00000058665 714 ntBASIC15.04■□□□□ -0
IsxA1A546 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
IsxA1A546 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.04■□□□□ -0
IsxA1A546 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IsxA1A546 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.03■□□□□ -0
IsxA1A546 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.03■□□□□ -0
IsxA1A546 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.03■□□□□ -0
IsxA1A546 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Gm13168-201ENSMUST00000121771 632 ntBASIC15.03■□□□□ -0
IsxA1A546 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Trmt13-210ENSMUST00000198454 880 ntBASIC15.03■□□□□ -0
IsxA1A546 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.03■□□□□ -0
IsxA1A546 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.03■□□□□ -0
IsxA1A546 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
IsxA1A546 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.03■□□□□ -0
IsxA1A546 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.03■□□□□ -0
IsxA1A546 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IsxA1A546 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms