Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm44430-201ENSMUST00000203376 995 ntBASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-4A0A0B4J1K2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav9-4A0A0B4J1K2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm27704-201ENSMUST00000185094 107 ntBASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm7367-201ENSMUST00000057611 492 ntBASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms