Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm11336-201ENSMUST00000118168 334 ntBASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm7889-201ENSMUST00000185591 958 ntBASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm44450-201ENSMUST00000199528 114 ntBASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm18421-201ENSMUST00000204122 625 ntBASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm18959-201ENSMUST00000208954 655 ntBASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav21-dv12A0A075B6C4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms