Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8n-2A0A075B633 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Gm4995-201ENSMUST00000117247 432 ntBASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8n-2A0A075B633 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Gm27646-201ENSMUST00000183989 110 ntBASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trav8n-2A0A075B633 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Gm10175-201ENSMUST00000086013 645 ntBASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8n-2A0A075B633 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms