Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL050343.2-201ENST00000607338 280 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AC009318.2-201ENST00000610917 651 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AL442067.2-201ENST00000614033 363 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.23□□□□□ -2.05
NKX2-1P43699 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NKX2-1P43699 AC096644.4-201ENST00000563417 2912 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NKX2-1P43699 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NKX2-1P43699 RNU6-212P-201ENST00000362642 104 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 SNORA25.6-201ENST00000364121 118 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 Y_RNA.395-201ENST00000383945 109 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 MIR29B2-201ENST00000385055 81 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 SNORA75.6-201ENST00000391318 127 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX2-1P43699 AC022018.1-201ENST00000430685 241 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AC236972.1-201ENST00000433225 199 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AL513124.1-201ENST00000450410 614 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AC140059.1-201ENST00000489238 361 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AC016632.1-201ENST00000503994 196 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AC008885.1-201ENST00000514930 301 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 SNORA25.11-201ENST00000515935 105 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 SNORA48.11-201ENST00000517015 89 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 SUB1P3-201ENST00000564581 315 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 MIR5701-3-201ENST00000578890 82 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 MIR5701-1-201ENST00000585138 82 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AL138963.2-201ENST00000605137 226 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AC133104.2-201ENST00000615272 193 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 MIR5701-2-201ENST00000615634 82 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AL359314.1-201ENST00000616913 261 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AC126177.8-201ENST00000618339 1015 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AC097372.5-201ENST00000623665 376 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 AL450472.1-202ENST00000637286 180 ntBASIC2.22□□□□□ -2.05
NKX2-1P43699 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NKX2-1P43699 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.22□□□□□ -2.05
NKX2-1P43699 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NKX2-1P43699 AC073346.2-201ENST00000624724 2058 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 MIR6073-201ENST00000352083 89 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 Y_RNA.40-201ENST00000362645 93 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 RNU5B-2P-201ENST00000363036 113 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 RNA5SP393-201ENST00000363423 117 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 RNU6-595P-201ENST00000363944 107 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 RNU1-140P-201ENST00000365040 165 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 RNU6-142P-201ENST00000384019 107 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
NKX2-1P43699 MTCYBP2-201ENST00000407745 171 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 RNU6-370P-201ENST00000411008 104 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 RPS26P42-201ENST00000413485 326 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.21□□□□□ -2.06
NKX2-1P43699 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.21□□□□□ -2.06
NKX2-1P43699 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.21□□□□□ -2.06
NKX2-1P43699 AC243428.1-201ENST00000421099 264 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.21□□□□□ -2.06
NKX2-1P43699 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.21□□□□□ -2.06
NKX2-1P43699 UBE2V1P7-201ENST00000446395 340 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 Y_RNA.639-201ENST00000458981 102 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 Y_RNA.653-201ENST00000459091 95 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 MTND4P17-201ENST00000470444 350 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.21□□□□□ -2.06
NKX2-1P43699 HMGN1P13-201ENST00000505795 138 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
NKX2-1P43699 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.21□□□□□ -2.06
NKX2-1P43699 AC005741.1-201ENST00000511094 432 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.21□□□□□ -2.06
NKX2-1P43699 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.21□□□□□ -2.06
NKX2-1P43699 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NKX2-1P43699 AC009229.3-201ENST00000608056 282 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 AC135507.2-201ENST00000612443 309 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 AC005520.5-201ENST00000613926 164 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.21□□□□□ -2.06
NKX2-1P43699 AL160413.1-201ENST00000622780 310 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NKX2-1P43699 SNORA43.4-201ENST00000629559 138 ntBASIC2.21□□□□□ -2.06
NKX2-1P43699 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.2□□□□□ -2.06
NKX2-1P43699 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NKX2-1P43699 MTND5P10-201ENST00000603719 1809 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
NKX2-1P43699 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NKX2-1P43699 MIR422A-201ENST00000362286 90 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 Y_RNA.67-201ENST00000362870 100 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 RNA5SP374-201ENST00000362939 125 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 RNU6-137P-201ENST00000363680 108 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 SNORA38-201ENST00000363946 132 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 Y_RNA.813-201ENST00000364639 102 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 SNORD42.2-201ENST00000365570 69 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 RNU6-1286P-201ENST00000383871 107 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 Y_RNA.404-201ENST00000383978 102 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 RNU6-790P-201ENST00000384479 105 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 RNU6-310P-201ENST00000384655 107 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 RNU6-1072P-201ENST00000384703 107 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 RNU6-443P-201ENST00000384780 107 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 AL138885.1-201ENST00000405921 675 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NKX2-1P43699 AC244670.1-201ENST00000436879 112 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.2□□□□□ -2.06
NKX2-1P43699 RNU7-26P-201ENST00000458980 63 ntBASIC2.2□□□□□ -2.06
NKX2-1P43699 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.2□□□□□ -2.06
NKX2-1P43699 RPL30P10-201ENST00000488148 337 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms