Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 BTF3P8-201ENST00000414577 526 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 RNA5SP216-201ENST00000516111 123 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 AC006199.1-201ENST00000548728 219 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 AL353765.1-201ENST00000605514 183 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 AL139286.2-201ENST00000606838 396 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.31□□□□□ -2.46
COL6A5A8TX70 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL6A5A8TX70 AC008628.1-201ENST00000508663 265 ntBASIC-0.31□□□□□ -2.46
COL6A5A8TX70 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.31□□□□□ -2.46
COL6A5A8TX70 AC112693.2-201ENST00000556538 232 ntBASIC-0.31□□□□□ -2.46
COL6A5A8TX70 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.31□□□□□ -2.46
COL6A5A8TX70 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.31□□□□□ -2.46
COL6A5A8TX70 RNU6-756P-201ENST00000383997 107 ntBASIC-0.31□□□□□ -2.46
COL6A5A8TX70 RNU6-712P-201ENST00000410558 100 ntBASIC-0.31□□□□□ -2.46
COL6A5A8TX70 MTND4P32-201ENST00000437189 1237 ntBASIC-0.31□□□□□ -2.46
COL6A5A8TX70 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL6A5A8TX70 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL6A5A8TX70 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.31□□□□□ -2.46
COL6A5A8TX70 RNA5SP272-201ENST00000516095 111 ntBASIC-0.31□□□□□ -2.46
COL6A5A8TX70 RN7SKP258-201ENST00000517151 304 ntBASIC-0.31□□□□□ -2.46
COL6A5A8TX70 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
COL6A5A8TX70 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL6A5A8TX70 ARL5AP1-201ENST00000418991 388 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AL953862.1-201ENST00000423016 168 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
COL6A5A8TX70 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AC007969.2-201ENST00000441891 191 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AC095057.3-201ENST00000567102 1157 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AF038458.1-201ENST00000588406 262 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 MIR8076-201ENST00000611401 83 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AC078938.1-201ENST00000620993 318 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 MIR335-201ENST00000362173 94 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 RNU6-251P-201ENST00000363235 104 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 RNU2-49P-201ENST00000410666 184 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 USP9YP29-201ENST00000445112 563 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.32□□□□□ -2.46
COL6A5A8TX70 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL6A5A8TX70 RNA5SP503-201ENST00000517047 117 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 ZNF705CP-201ENST00000530515 889 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AC023157.2-201ENST00000540596 141 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 ADAM3B-201ENST00000569937 840 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 MIR5692A1-201ENST00000580523 69 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AC008536.2-201ENST00000607284 349 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 7SK.10-201ENST00000621414 298 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 AL359697.1-201ENST00000624879 587 ntBASIC-0.32□□□□□ -2.46
COL6A5A8TX70 RNU6-1331P-201ENST00000363658 106 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 RNU6-650P-201ENST00000365658 111 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AC007435.1-201ENST00000421086 415 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.33□□□□□ -2.46
COL6A5A8TX70 MTCO3P43-201ENST00000440974 771 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 HMGN1P13-201ENST00000505795 138 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.33□□□□□ -2.46
COL6A5A8TX70 MIR5697-201ENST00000578045 78 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AC242628.1-201ENST00000606810 391 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AL355073.2-201ENST00000612106 557 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.33□□□□□ -2.46
COL6A5A8TX70 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 SNORA24.1-201ENST00000384401 135 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.33□□□□□ -2.46
COL6A5A8TX70 RPL30P15-201ENST00000457129 321 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AC104164.3-201ENST00000467363 1258 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.33□□□□□ -2.46
COL6A5A8TX70 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 CYCSP27-201ENST00000527643 293 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AC105148.1-201ENST00000604961 409 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AL355802.4-201ENST00000607635 548 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AC092953.2-201ENST00000608000 699 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 AL445584.3-201ENST00000617173 78 ntBASIC-0.33□□□□□ -2.46
COL6A5A8TX70 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
COL6A5A8TX70 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AL161935.2-201ENST00000414627 60 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AC006210.1-201ENST00000424882 111 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AC069113.3-201ENST00000521019 150 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
COL6A5A8TX70 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 SNORA25B-201ENST00000365507 128 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AL158050.1-201ENST00000416077 457 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 SNX2P2-201ENST00000424553 323 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL6A5A8TX70 RNA5SP470-201ENST00000516463 106 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 RNU6-980P-201ENST00000516925 103 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 RNU6-165P-201ENST00000517170 99 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 MIR5591-201ENST00000578248 65 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AP003465.2-201ENST00000602571 373 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms