Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 TRBVA-201ENST00000498804 316 ntBASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 PDCD5P2-201ENST00000507570 312 ntBASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 MIR4709-201ENST00000577272 72 ntBASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 MIR3136-201ENST00000583498 78 ntBASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 DEFB131E-202ENST00000602581 683 ntBASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.63□□□□□ -2.31
CTNNBIP1Q9NSA3 RNU6-142P-201ENST00000384019 107 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 RNU11-5P-201ENST00000391216 129 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 AC006366.1-201ENST00000422002 759 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 TOMM22P6-201ENST00000465035 409 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 SNORA31.16-201ENST00000516773 139 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 RNU6-165P-201ENST00000517170 99 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 AC023050.2-201ENST00000544968 387 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 AL442163.3-201ENST00000554110 156 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 AC008751.2-201ENST00000597885 980 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 AC131159.1-201ENST00000621854 213 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 SNORD98-201ENST00000636377 67 ntBASIC0.62□□□□□ -2.31
CTNNBIP1Q9NSA3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 RNU6-1123P-201ENST00000362347 106 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 RNY4P24-201ENST00000362735 96 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 Y_RNA.327-201ENST00000365201 102 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 RNU6-723P-201ENST00000383973 107 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 SNORA12.2-201ENST00000391040 156 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 GTF2IP13-201ENST00000438487 386 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 AC073910.1-201ENST00000445047 438 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 SNORA31.4-201ENST00000516049 129 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 AC013828.2-201ENST00000532487 235 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 MTND4LP25-201ENST00000570218 163 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 MIR4698-201ENST00000577795 80 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 AC105129.3-201ENST00000605455 485 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 AC092106.3-201ENST00000611308 722 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 AP000943.4-201ENST00000622912 357 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 AC126544.2-201ENST00000625174 749 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 AC103706.2-201ENST00000638080 240 ntBASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.61□□□□□ -2.31
CTNNBIP1Q9NSA3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 SNORA63.3-201ENST00000362682 132 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 RNU6-527P-201ENST00000363425 104 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 RNU5E-7P-201ENST00000365290 117 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 RNU6-53P-201ENST00000365367 106 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 MIR578-201ENST00000384828 96 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AC114482.1-201ENST00000418010 247 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AC063976.4-201ENST00000421971 163 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AC007395.1-201ENST00000451333 677 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AC011979.2-201ENST00000527568 352 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 HMGN1P30-201ENST00000589286 268 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AC110760.3-201ENST00000598794 467 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AC008945.2-201ENST00000606056 604 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AC108747.1-201ENST00000609508 535 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 AC104073.3-201ENST00000610942 955 ntBASIC0.6□□□□□ -2.31
CTNNBIP1Q9NSA3 RNU4-79P-201ENST00000362764 141 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 SNORD31B-201ENST00000364977 69 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 MTCYBP2-201ENST00000407745 171 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 AC019070.1-201ENST00000415008 1024 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 USP9YP14-201ENST00000430663 563 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 MTND5P15-201ENST00000434246 349 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 AC016925.1-201ENST00000458303 298 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 SNORD124-201ENST00000459577 104 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 ARL2BPP4-201ENST00000506854 471 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 AC074344.1-201ENST00000512823 224 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 AC090142.3-201ENST00000519012 385 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 ADI1P3-201ENST00000549509 470 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 AC109446.1-201ENST00000566172 220 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 AC098848.2-201ENST00000588023 330 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 VN1R107P-201ENST00000601784 209 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 AL158032.1-201ENST00000605401 106 ntBASIC0.59□□□□□ -2.31
CTNNBIP1Q9NSA3 Y_RNA.140-201ENST00000363474 103 ntBASIC0.58□□□□□ -2.32
CTNNBIP1Q9NSA3 MIR200A-201ENST00000384875 90 ntBASIC0.58□□□□□ -2.32
CTNNBIP1Q9NSA3 MIR23A-201ENST00000385245 73 ntBASIC0.58□□□□□ -2.32
CTNNBIP1Q9NSA3 SNORD12-201ENST00000391002 90 ntBASIC0.58□□□□□ -2.32
CTNNBIP1Q9NSA3 AL117342.1-201ENST00000404861 406 ntBASIC0.58□□□□□ -2.32
CTNNBIP1Q9NSA3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.58□□□□□ -2.32
CTNNBIP1Q9NSA3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.58□□□□□ -2.32
CTNNBIP1Q9NSA3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms