Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.83□□□□□ -2.28
TPM4P67936 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.83□□□□□ -2.28
TPM4P67936 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.83□□□□□ -2.28
TPM4P67936 SNORA31.16-201ENST00000516773 139 ntBASIC0.83□□□□□ -2.28
TPM4P67936 AC015712.3-201ENST00000559380 164 ntBASIC0.83□□□□□ -2.28
TPM4P67936 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.83□□□□□ -2.28
TPM4P67936 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.83□□□□□ -2.28
TPM4P67936 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
TPM4P67936 AC104073.3-201ENST00000610942 955 ntBASIC0.83□□□□□ -2.28
TPM4P67936 AC092106.3-201ENST00000611308 722 ntBASIC0.83□□□□□ -2.28
TPM4P67936 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.82□□□□□ -2.28
TPM4P67936 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
TPM4P67936 SNORD116-12-201ENST00000384468 92 ntBASIC0.82□□□□□ -2.28
TPM4P67936 MIR222-201ENST00000384992 110 ntBASIC0.82□□□□□ -2.28
TPM4P67936 AL136310.1-201ENST00000404926 654 ntBASIC0.82□□□□□ -2.28
TPM4P67936 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
TPM4P67936 AL031779.1-201ENST00000415663 330 ntBASIC0.82□□□□□ -2.28
TPM4P67936 MTCYBP39-201ENST00000437562 491 ntBASIC0.82□□□□□ -2.28
TPM4P67936 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.82□□□□□ -2.28
TPM4P67936 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.82□□□□□ -2.28
TPM4P67936 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TPM4P67936 RNU1-96P-201ENST00000364163 162 ntBASIC0.81□□□□□ -2.28
TPM4P67936 Y_RNA.327-201ENST00000365201 102 ntBASIC0.81□□□□□ -2.28
TPM4P67936 RNU6-142P-201ENST00000384019 107 ntBASIC0.81□□□□□ -2.28
TPM4P67936 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
TPM4P67936 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
TPM4P67936 AC019070.1-201ENST00000415008 1024 ntBASIC0.81□□□□□ -2.28
TPM4P67936 AC006366.1-201ENST00000422002 759 ntBASIC0.81□□□□□ -2.28
TPM4P67936 AC010099.3-201ENST00000423896 409 ntBASIC0.81□□□□□ -2.28
TPM4P67936 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.81□□□□□ -2.28
TPM4P67936 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
TPM4P67936 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.81□□□□□ -2.28
TPM4P67936 ARL2BPP4-201ENST00000506854 471 ntBASIC0.81□□□□□ -2.28
TPM4P67936 AC104806.1-201ENST00000508720 308 ntBASIC0.81□□□□□ -2.28
TPM4P67936 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.81□□□□□ -2.28
TPM4P67936 AC010587.2-201ENST00000511727 448 ntBASIC0.81□□□□□ -2.28
TPM4P67936 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
TPM4P67936 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.81□□□□□ -2.28
TPM4P67936 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.81□□□□□ -2.28
TPM4P67936 AC068620.3-201ENST00000602749 560 ntBASIC0.81□□□□□ -2.28
TPM4P67936 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.81□□□□□ -2.28
TPM4P67936 AP002782.1-201ENST00000623107 614 ntBASIC0.81□□□□□ -2.28
TPM4P67936 SNORD98-201ENST00000636377 67 ntBASIC0.81□□□□□ -2.28
TPM4P67936 AC103706.2-201ENST00000638080 240 ntBASIC0.81□□□□□ -2.28
TPM4P67936 AC008163.1-202ENST00000636004 2889 ntBASIC0.81□□□□□ -2.28
TPM4P67936 AL445523.1-201ENST00000451184 1362 ntBASIC0.81□□□□□ -2.28
TPM4P67936 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.81□□□□□ -2.28
TPM4P67936 RNU6-433P-201ENST00000363216 104 ntBASIC0.8□□□□□ -2.28
TPM4P67936 SNORA4.1-201ENST00000364263 144 ntBASIC0.8□□□□□ -2.28
TPM4P67936 RNU6-53P-201ENST00000365367 106 ntBASIC0.8□□□□□ -2.28
TPM4P67936 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.8□□□□□ -2.28
TPM4P67936 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.8□□□□□ -2.28
TPM4P67936 RPS26P45-201ENST00000471748 340 ntBASIC0.8□□□□□ -2.28
TPM4P67936 RNU1-86P-201ENST00000516108 154 ntBASIC0.8□□□□□ -2.28
TPM4P67936 RNU1-107P-201ENST00000516617 154 ntBASIC0.8□□□□□ -2.28
TPM4P67936 SNORA70.22-201ENST00000517160 124 ntBASIC0.8□□□□□ -2.28
TPM4P67936 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.8□□□□□ -2.28
TPM4P67936 AC011979.2-201ENST00000527568 352 ntBASIC0.8□□□□□ -2.28
TPM4P67936 AC123904.2-201ENST00000548059 300 ntBASIC0.8□□□□□ -2.28
TPM4P67936 AL442163.3-201ENST00000554110 156 ntBASIC0.8□□□□□ -2.28
TPM4P67936 MIR3136-201ENST00000583498 78 ntBASIC0.8□□□□□ -2.28
TPM4P67936 VN1R107P-201ENST00000601784 209 ntBASIC0.8□□□□□ -2.28
TPM4P67936 AL158032.1-201ENST00000605401 106 ntBASIC0.8□□□□□ -2.28
TPM4P67936 AC084824.5-201ENST00000612009 413 ntBASIC0.8□□□□□ -2.28
TPM4P67936 RNU5E-7P-201ENST00000365290 117 ntBASIC0.79□□□□□ -2.28
TPM4P67936 Y_RNA.465-201ENST00000384293 102 ntBASIC0.79□□□□□ -2.28
TPM4P67936 MTCYBP2-201ENST00000407745 171 ntBASIC0.79□□□□□ -2.28
TPM4P67936 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.79□□□□□ -2.28
TPM4P67936 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.79□□□□□ -2.28
TPM4P67936 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.79□□□□□ -2.28
TPM4P67936 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.79□□□□□ -2.28
TPM4P67936 MTND5P2-201ENST00000442927 1142 ntBASIC0.79□□□□□ -2.28
TPM4P67936 AL360271.2-201ENST00000447710 161 ntBASIC0.79□□□□□ -2.28
TPM4P67936 AL163540.1-201ENST00000485382 386 ntBASIC0.79□□□□□ -2.28
TPM4P67936 RNU6-165P-201ENST00000517170 99 ntBASIC0.79□□□□□ -2.28
TPM4P67936 MTND2P7-201ENST00000521337 640 ntBASIC0.79□□□□□ -2.28
TPM4P67936 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.79□□□□□ -2.28
TPM4P67936 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.79□□□□□ -2.28
TPM4P67936 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.79□□□□□ -2.28
TPM4P67936 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.79□□□□□ -2.28
TPM4P67936 ADI1P3-201ENST00000549509 470 ntBASIC0.79□□□□□ -2.28
TPM4P67936 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.79□□□□□ -2.28
TPM4P67936 AC110760.3-201ENST00000598794 467 ntBASIC0.79□□□□□ -2.28
TPM4P67936 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TPM4P67936 Y_RNA.140-201ENST00000363474 103 ntBASIC0.78□□□□□ -2.28
TPM4P67936 RNY4P16-201ENST00000364768 94 ntBASIC0.78□□□□□ -2.28
TPM4P67936 AL117342.1-201ENST00000404861 406 ntBASIC0.78□□□□□ -2.28
TPM4P67936 COX6CP10-201ENST00000416832 224 ntBASIC0.78□□□□□ -2.28
TPM4P67936 RPL22P18-201ENST00000417197 377 ntBASIC0.78□□□□□ -2.28
TPM4P67936 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
TPM4P67936 MTND1P32-201ENST00000433043 938 ntBASIC0.78□□□□□ -2.28
TPM4P67936 TOMM22P6-201ENST00000465035 409 ntBASIC0.78□□□□□ -2.28
TPM4P67936 RNU6-197P-201ENST00000516680 100 ntBASIC0.78□□□□□ -2.28
TPM4P67936 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.78□□□□□ -2.28
TPM4P67936 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.78□□□□□ -2.28
TPM4P67936 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.78□□□□□ -2.28
TPM4P67936 AC098848.2-201ENST00000588023 330 ntBASIC0.78□□□□□ -2.28
TPM4P67936 AC108706.1-201ENST00000611053 297 ntBASIC0.78□□□□□ -2.28
TPM4P67936 AC012409.4-201ENST00000612923 249 ntBASIC0.78□□□□□ -2.28
TPM4P67936 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms