Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
TPM3P06753 SNORA32.2-201ENST00000384049 122 ntBASIC0.83□□□□□ -2.28
TPM3P06753 SNORD116-12-201ENST00000384468 92 ntBASIC0.83□□□□□ -2.28
TPM3P06753 MIR19B1-201ENST00000384829 87 ntBASIC0.83□□□□□ -2.28
TPM3P06753 SNORA12.2-201ENST00000391040 156 ntBASIC0.83□□□□□ -2.28
TPM3P06753 AL136310.1-201ENST00000404926 654 ntBASIC0.83□□□□□ -2.28
TPM3P06753 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.83□□□□□ -2.28
TPM3P06753 MTCO3P29-201ENST00000432119 779 ntBASIC0.83□□□□□ -2.28
TPM3P06753 AL591043.1-201ENST00000432461 424 ntBASIC0.83□□□□□ -2.28
TPM3P06753 MTND5P15-201ENST00000434246 349 ntBASIC0.83□□□□□ -2.28
TPM3P06753 MTCYBP39-201ENST00000437562 491 ntBASIC0.83□□□□□ -2.28
TPM3P06753 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.83□□□□□ -2.28
TPM3P06753 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.83□□□□□ -2.28
TPM3P06753 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.83□□□□□ -2.28
TPM3P06753 AC010587.2-201ENST00000511727 448 ntBASIC0.83□□□□□ -2.28
TPM3P06753 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
TPM3P06753 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.83□□□□□ -2.28
TPM3P06753 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.83□□□□□ -2.28
TPM3P06753 SNORA31.16-201ENST00000516773 139 ntBASIC0.83□□□□□ -2.28
TPM3P06753 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.83□□□□□ -2.28
TPM3P06753 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.82□□□□□ -2.28
TPM3P06753 RNU6-433P-201ENST00000363216 104 ntBASIC0.82□□□□□ -2.28
TPM3P06753 RNU1-96P-201ENST00000364163 162 ntBASIC0.82□□□□□ -2.28
TPM3P06753 RNU6-142P-201ENST00000384019 107 ntBASIC0.82□□□□□ -2.28
TPM3P06753 Y_RNA.465-201ENST00000384293 102 ntBASIC0.82□□□□□ -2.28
TPM3P06753 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
TPM3P06753 AC019070.1-201ENST00000415008 1024 ntBASIC0.82□□□□□ -2.28
TPM3P06753 AC006366.1-201ENST00000422002 759 ntBASIC0.82□□□□□ -2.28
TPM3P06753 AC069257.2-201ENST00000441819 155 ntBASIC0.82□□□□□ -2.28
TPM3P06753 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.82□□□□□ -2.28
TPM3P06753 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.82□□□□□ -2.28
TPM3P06753 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.82□□□□□ -2.28
TPM3P06753 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.82□□□□□ -2.28
TPM3P06753 AC123904.2-201ENST00000548059 300 ntBASIC0.82□□□□□ -2.28
TPM3P06753 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
TPM3P06753 AC068620.3-201ENST00000602749 560 ntBASIC0.82□□□□□ -2.28
TPM3P06753 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.82□□□□□ -2.28
TPM3P06753 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TPM3P06753 AC084824.5-201ENST00000612009 413 ntBASIC0.82□□□□□ -2.28
TPM3P06753 AP002782.1-201ENST00000623107 614 ntBASIC0.82□□□□□ -2.28
TPM3P06753 AL445523.1-201ENST00000451184 1362 ntBASIC0.82□□□□□ -2.28
TPM3P06753 MIR222-201ENST00000384992 110 ntBASIC0.81□□□□□ -2.28
TPM3P06753 AC010099.3-201ENST00000423896 409 ntBASIC0.81□□□□□ -2.28
TPM3P06753 AL360271.2-201ENST00000447710 161 ntBASIC0.81□□□□□ -2.28
TPM3P06753 AC104806.1-201ENST00000508720 308 ntBASIC0.81□□□□□ -2.28
TPM3P06753 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.81□□□□□ -2.28
TPM3P06753 RNU1-86P-201ENST00000516108 154 ntBASIC0.81□□□□□ -2.28
TPM3P06753 RNU1-107P-201ENST00000516617 154 ntBASIC0.81□□□□□ -2.28
TPM3P06753 AC011979.2-201ENST00000527568 352 ntBASIC0.81□□□□□ -2.28
TPM3P06753 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.81□□□□□ -2.28
TPM3P06753 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.81□□□□□ -2.28
TPM3P06753 AC098848.2-201ENST00000588023 330 ntBASIC0.81□□□□□ -2.28
TPM3P06753 AL158032.1-201ENST00000605401 106 ntBASIC0.81□□□□□ -2.28
TPM3P06753 SNORD98-201ENST00000636377 67 ntBASIC0.81□□□□□ -2.28
TPM3P06753 AC103706.2-201ENST00000638080 240 ntBASIC0.81□□□□□ -2.28
TPM3P06753 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.81□□□□□ -2.28
TPM3P06753 SNORA4.1-201ENST00000364263 144 ntBASIC0.8□□□□□ -2.28
TPM3P06753 Y_RNA.327-201ENST00000365201 102 ntBASIC0.8□□□□□ -2.28
TPM3P06753 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
TPM3P06753 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.8□□□□□ -2.28
TPM3P06753 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.8□□□□□ -2.28
TPM3P06753 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.8□□□□□ -2.28
TPM3P06753 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
TPM3P06753 MTND5P2-201ENST00000442927 1142 ntBASIC0.8□□□□□ -2.28
TPM3P06753 RPS26P45-201ENST00000471748 340 ntBASIC0.8□□□□□ -2.28
TPM3P06753 AL163540.1-201ENST00000485382 386 ntBASIC0.8□□□□□ -2.28
TPM3P06753 MTND2P7-201ENST00000521337 640 ntBASIC0.8□□□□□ -2.28
TPM3P06753 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.8□□□□□ -2.28
TPM3P06753 ADI1P3-201ENST00000549509 470 ntBASIC0.8□□□□□ -2.28
TPM3P06753 AL442163.3-201ENST00000554110 156 ntBASIC0.8□□□□□ -2.28
TPM3P06753 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.8□□□□□ -2.28
TPM3P06753 MIR3136-201ENST00000583498 78 ntBASIC0.8□□□□□ -2.28
TPM3P06753 AC110760.3-201ENST00000598794 467 ntBASIC0.8□□□□□ -2.28
TPM3P06753 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TPM3P06753 Y_RNA.110-201ENST00000363220 99 ntBASIC0.79□□□□□ -2.28
TPM3P06753 RNU6-527P-201ENST00000363425 104 ntBASIC0.79□□□□□ -2.28
TPM3P06753 RNY4P16-201ENST00000364768 94 ntBASIC0.79□□□□□ -2.28
TPM3P06753 RNU5E-7P-201ENST00000365290 117 ntBASIC0.79□□□□□ -2.28
TPM3P06753 RNU6-53P-201ENST00000365367 106 ntBASIC0.79□□□□□ -2.28
TPM3P06753 AL117342.1-201ENST00000404861 406 ntBASIC0.79□□□□□ -2.28
TPM3P06753 MTCYBP2-201ENST00000407745 171 ntBASIC0.79□□□□□ -2.28
TPM3P06753 COX6CP10-201ENST00000416832 224 ntBASIC0.79□□□□□ -2.28
TPM3P06753 RPL22P18-201ENST00000417197 377 ntBASIC0.79□□□□□ -2.28
TPM3P06753 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.79□□□□□ -2.28
TPM3P06753 MTND1P32-201ENST00000433043 938 ntBASIC0.79□□□□□ -2.28
TPM3P06753 TOMM22P6-201ENST00000465035 409 ntBASIC0.79□□□□□ -2.28
TPM3P06753 ARL2BPP4-201ENST00000506854 471 ntBASIC0.79□□□□□ -2.28
TPM3P06753 SNORA70.22-201ENST00000517160 124 ntBASIC0.79□□□□□ -2.28
TPM3P06753 RNU6-165P-201ENST00000517170 99 ntBASIC0.79□□□□□ -2.28
TPM3P06753 AC136628.3-201ENST00000521868 290 ntBASIC0.79□□□□□ -2.28
TPM3P06753 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.79□□□□□ -2.28
TPM3P06753 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.79□□□□□ -2.28
TPM3P06753 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.79□□□□□ -2.28
TPM3P06753 VN1R107P-201ENST00000601784 209 ntBASIC0.79□□□□□ -2.28
TPM3P06753 AC108706.1-201ENST00000611053 297 ntBASIC0.79□□□□□ -2.28
TPM3P06753 AC012409.4-201ENST00000612923 249 ntBASIC0.79□□□□□ -2.28
TPM3P06753 RNU6-1080P-201ENST00000383982 107 ntBASIC0.78□□□□□ -2.28
TPM3P06753 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.78□□□□□ -2.28
TPM3P06753 AL353777.1-201ENST00000425552 326 ntBASIC0.78□□□□□ -2.28
TPM3P06753 AC073910.1-201ENST00000445047 438 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms