Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-1105P-201ENST00000384774 107 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 RNA5SP252-201ENST00000391131 119 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 RNU6-754P-201ENST00000391166 107 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 SNORA26.9-201ENST00000391322 122 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 EIF4E2P1-201ENST00000393781 255 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 CISD1P1-201ENST00000393907 327 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 Y_RNA.605-201ENST00000410577 105 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 AC005094.1-201ENST00000440420 368 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 MTCYBP40-201ENST00000509390 1135 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 RNU6-295P-201ENST00000516901 104 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 Y_RNA.720-201ENST00000517166 92 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 HMGB1P14-201ENST00000557424 591 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 MIR4293-201ENST00000584305 78 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 AF038458.1-201ENST00000588406 262 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 AC006006.1-201ENST00000603082 144 ntBASIC2.69□□□□□ -1.98
SNED1Q8TER0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.69□□□□□ -1.98
SNED1Q8TER0 Y_RNA.338-201ENST00000365320 114 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 SNORD116-11-201ENST00000383882 92 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RNU6-196P-201ENST00000384315 107 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 Y_RNA.482-201ENST00000384377 111 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 MIR450B-201ENST00000401182 78 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RNU4-46P-201ENST00000410818 138 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 UBE2FP1-201ENST00000416536 447 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AL358176.2-201ENST00000425769 204 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 AL137792.2-201ENST00000443484 235 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC098591.2-201ENST00000510152 315 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC108078.2-201ENST00000510750 236 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 IMMP1LP2-201ENST00000552954 492 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 AP000654.2-201ENST00000605633 586 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC012409.4-201ENST00000612923 249 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AL161629.2-201ENST00000615347 275 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC010378.1-201ENST00000619270 362 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC090617.7-201ENST00000623952 126 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 MTND4P1-201ENST00000457501 1466 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 AL049641.1-201ENST00000441055 1948 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RNU6-1309P-201ENST00000363305 108 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 MIR135A2-201ENST00000384854 100 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RNU6-550P-201ENST00000391057 101 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AL109755.1-201ENST00000401791 649 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AL139397.2-201ENST00000404529 772 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RNU6-387P-201ENST00000411331 105 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AL139156.1-201ENST00000412785 841 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RPL21P24-201ENST00000413752 448 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RAC1P6-201ENST00000423911 575 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC234775.1-201ENST00000454247 670 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 MTCO3P10-201ENST00000455912 772 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 ELOCP24-201ENST00000456370 334 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RPL23AP42-201ENST00000471152 471 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 RPL21P93-201ENST00000480465 489 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RPL30P5-201ENST00000494923 336 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 RBBP4P6-201ENST00000508098 202 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RNU6-189P-201ENST00000516120 101 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 RNU6-1137P-201ENST00000517073 99 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 SNORA31.26-201ENST00000517250 137 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC022634.1-201ENST00000520765 532 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC008162.1-201ENST00000604718 254 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AL670379.4-201ENST00000605279 254 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC133104.2-201ENST00000615272 193 ntBASIC2.68□□□□□ -1.98
SNED1Q8TER0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.68□□□□□ -1.98
SNED1Q8TER0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNED1Q8TER0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNED1Q8TER0 RNU6-1284P-201ENST00000363701 100 ntBASIC2.67□□□□□ -1.98
SNED1Q8TER0 RNU6-601P-201ENST00000384540 107 ntBASIC2.67□□□□□ -1.98
SNED1Q8TER0 RNA5SP219-201ENST00000390940 113 ntBASIC2.67□□□□□ -1.98
SNED1Q8TER0 SNORA17.3-201ENST00000391159 129 ntBASIC2.67□□□□□ -1.98
SNED1Q8TER0 CALM2P2-201ENST00000428512 440 ntBASIC2.67□□□□□ -1.98
SNED1Q8TER0 AL590383.1-201ENST00000428602 75 ntBASIC2.67□□□□□ -1.98
SNED1Q8TER0 AL160004.2-201ENST00000432935 350 ntBASIC2.67□□□□□ -1.98
SNED1Q8TER0 RPL23AP58-201ENST00000440453 469 ntBASIC2.67□□□□□ -1.98
SNED1Q8TER0 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.67□□□□□ -1.98
SNED1Q8TER0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.67□□□□□ -1.98
SNED1Q8TER0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.67□□□□□ -1.98
SNED1Q8TER0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms