Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 BNIP3P16-201ENST00000589779 534 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AC044792.1-201ENST00000593294 196 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AL162274.2-201ENST00000614406 332 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 MIR3529-201ENST00000637713 78 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AC241585.2-209ENST00000638217 143 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AC108206.1-201ENST00000570186 4159 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 AC093831.2-201ENST00000624393 3427 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 MIR208A-201ENST00000362287 71 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 U8.8-201ENST00000365399 135 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 Y_RNA.394-201ENST00000383942 103 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-842P-201ENST00000384269 107 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 RPL19P1-201ENST00000411635 428 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 AC005741.1-201ENST00000511094 432 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 RNA5SP341-201ENST00000516261 117 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-1153P-201ENST00000516760 105 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 Y_RNA.701-201ENST00000516812 110 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 SNORA31.23-201ENST00000517219 133 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 MIR4719-201ENST00000585233 84 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 VN1R107P-201ENST00000601784 209 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 AL356055.1-201ENST00000602528 446 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 AL137843.1-201ENST00000605078 385 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 AC019159.1-201ENST00000605094 187 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 AC080078.3-201ENST00000605407 463 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 AC133104.2-201ENST00000615272 193 ntBASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDK5RAP3Q96JB5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 AC026241.1-201ENST00000517873 2142 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 SNORA9.2-201ENST00000365361 133 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-43P-201ENST00000384302 107 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-843P-201ENST00000384454 104 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-692P-201ENST00000384496 107 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 MIR147B-201ENST00000390185 80 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 AC027575.1-201ENST00000481064 460 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 AC097473.1-201ENST00000508142 408 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-1170P-201ENST00000515974 106 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 HSPE1P20-201ENST00000538133 289 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 MIR4273-201ENST00000582824 84 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 MIR8076-201ENST00000611401 83 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 AC024581.2-201ENST00000619986 252 ntBASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CDK5RAP3Q96JB5 RBBP8P1-201ENST00000449447 1844 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 MAPK10-266ENST00000641066 6555 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-227P-201ENST00000362865 103 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 Y_RNA.146-201ENST00000363549 102 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 RNU1-140P-201ENST00000365040 165 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-331P-201ENST00000384724 107 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 FO393413.1-201ENST00000402892 195 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AL133475.1-201ENST00000404414 305 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC243964.1-201ENST00000441814 261 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC007677.1-201ENST00000445757 515 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 ELOCP24-201ENST00000456370 334 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 RNU7-152P-201ENST00000458982 64 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 GZMAP1-201ENST00000503054 631 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC093303.1-201ENST00000514549 295 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 RNA5SP384-201ENST00000516615 116 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 SNORA70.24-201ENST00000517233 118 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC093249.1-201ENST00000567049 203 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 MTCO3P13-201ENST00000577757 781 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AP001836.1-201ENST00000604675 523 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AC092608.2-201ENST00000624427 218 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 AL353743.1-202ENST00000431724 1695 ntBASIC3.3□□□□□ -1.88
CDK5RAP3Q96JB5 Y_RNA.187-201ENST00000363918 113 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-1180P-201ENST00000364935 107 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-748P-201ENST00000384648 107 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-1011P-201ENST00000384668 107 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 RN7SKP58-201ENST00000411010 305 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 RNA5SP344-201ENST00000411081 104 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 BMS1P22-201ENST00000414726 313 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 USMG5P1-201ENST00000425964 177 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 MTCO2P12-201ENST00000427426 682 ntBASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.29□□□□□ -1.88
CDK5RAP3Q96JB5 AC007969.2-201ENST00000441891 191 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms