Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AL358072.1-201ENST00000604156 575 ntBASIC0.23□□□□□ -2.37
SSBP1Q04837 KATNBL1P5-201ENST00000605015 517 ntBASIC0.23□□□□□ -2.37
SSBP1Q04837 CDR1-202ENST00000625883 1485 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
SSBP1Q04837 U3.8-201ENST00000363675 217 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 RNU6-1019P-201ENST00000364424 107 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 RNU1-93P-201ENST00000364704 169 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 RNU6-744P-201ENST00000365557 107 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 RNU6-1316P-201ENST00000384242 108 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.22□□□□□ -2.37
SSBP1Q04837 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.22□□□□□ -2.37
SSBP1Q04837 LARP1BP3-201ENST00000437229 869 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 SNRPEP8-201ENST00000442866 260 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 AL358794.1-201ENST00000445689 381 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 Z73417.1-201ENST00000447373 778 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.22□□□□□ -2.37
SSBP1Q04837 AC005840.1-201ENST00000498412 377 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 SNORA31.4-201ENST00000516049 129 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 SNORD79.1-201ENST00000516069 84 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 RNU6-229P-201ENST00000516614 102 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 SNORD60.2-201ENST00000516883 86 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.22□□□□□ -2.37
SSBP1Q04837 AC091489.2-201ENST00000566263 604 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
SSBP1Q04837 MIR4293-201ENST00000584305 78 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 BNIP3P8-201ENST00000597863 560 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 AC068790.6-201ENST00000602558 258 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 AC112204.3-201ENST00000623822 332 ntBASIC0.22□□□□□ -2.37
SSBP1Q04837 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.22□□□□□ -2.37
SSBP1Q04837 RNU6-792P-201ENST00000363490 107 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 Y_RNA.363-201ENST00000365529 113 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 RNU6-969P-201ENST00000383900 105 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 SNORA75B-201ENST00000384053 137 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 RNU6-701P-201ENST00000384059 107 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 RNU6-1122P-201ENST00000384449 107 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 SNORD116-20-201ENST00000384529 92 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SSBP1Q04837 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SSBP1Q04837 RNA5SP111-201ENST00000411386 101 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 RPS3AP37-201ENST00000419176 745 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.21□□□□□ -2.38
SSBP1Q04837 USP9YP14-201ENST00000430663 563 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 snoU109.2-201ENST00000459316 135 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 AC024589.1-201ENST00000512207 263 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 AF131216.2-201ENST00000512316 564 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 MTCO3P28-201ENST00000513351 515 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 RNU6-551P-201ENST00000516661 103 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 RNU6-64P-201ENST00000517119 105 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 CR383656.8-201ENST00000549046 145 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 AC018659.1-201ENST00000551083 169 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 SNORA59B-202ENST00000578183 701 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 MIR4714-201ENST00000580728 77 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 AC068620.3-201ENST00000602749 560 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.21□□□□□ -2.38
SSBP1Q04837 AC126177.8-201ENST00000618339 1015 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 AL158163.2-201ENST00000619110 700 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 AL159153.1-201ENST00000619688 317 ntBASIC0.21□□□□□ -2.38
SSBP1Q04837 MIR16-2-201ENST00000362117 81 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 RNA5SP99-201ENST00000364020 114 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 SNORA4.3-201ENST00000365564 137 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 SNORA12-201ENST00000391162 147 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 FCF1P10-201ENST00000407590 479 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 AC013262.1-201ENST00000426710 252 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 AL035398.1-201ENST00000430869 322 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.2□□□□□ -2.38
SSBP1Q04837 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.2□□□□□ -2.38
SSBP1Q04837 AC073910.1-201ENST00000445047 438 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 AL583843.1-201ENST00000456070 346 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 SNRPFP3-201ENST00000457792 225 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 AC104563.1-201ENST00000476147 376 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 MTND1P3-201ENST00000484956 952 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 RNU6-1315P-201ENST00000517187 99 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.2□□□□□ -2.38
SSBP1Q04837 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.2□□□□□ -2.38
SSBP1Q04837 AC007363.1-201ENST00000604736 620 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SSBP1Q04837 AC083806.3-201ENST00000614016 455 ntBASIC0.2□□□□□ -2.38
SSBP1Q04837 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.2□□□□□ -2.38
SSBP1Q04837 MIR96-201ENST00000362288 78 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 SNORD32B-201ENST00000364460 84 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 Y_RNA.534-201ENST00000384599 112 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 MIR19A-201ENST00000384878 82 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 MIR301A-201ENST00000385261 86 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 AF228730.1-201ENST00000397972 663 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 RNA5SP390-201ENST00000410191 113 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 COX6CP10-201ENST00000416832 224 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 ELOCP9-201ENST00000418624 239 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 AC011233.1-201ENST00000422812 283 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 AL590556.1-201ENST00000423231 483 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 MTCYBP5-201ENST00000423752 1135 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 DEFB130D-201ENST00000426866 237 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 MTCO2P12-201ENST00000427426 682 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 MTCO3P18-201ENST00000440206 761 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 SEPT14P24-201ENST00000447236 180 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 RPL18AP17-201ENST00000455326 198 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 MTCO3P7-201ENST00000510008 774 ntBASIC0.19□□□□□ -2.38
SSBP1Q04837 AC005741.1-201ENST00000511094 432 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms