Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MRPL42P2-201ENST00000403169 426 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AL513475.1-201ENST00000406602 315 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 RNU2-63P-201ENST00000410792 194 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 HIGD1AP15-201ENST00000416198 280 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AL109913.1-201ENST00000421173 514 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 MTCO3P46-201ENST00000425787 232 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AL356583.2-201ENST00000426536 280 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 UBE2D3P4-201ENST00000441973 436 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 FABP5P15-201ENST00000453566 214 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 RPL7P43-201ENST00000478876 753 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC139453.3-201ENST00000493276 369 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC098591.2-201ENST00000510152 315 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 RNU6-703P-201ENST00000516946 107 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC136619.2-201ENST00000563361 631 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC245014.2-201ENST00000603689 287 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC246785.4-201ENST00000605374 287 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AL627230.5-201ENST00000619807 58 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC099654.13-201ENST00000639774 207 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 MIR412-201ENST00000362142 91 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 SNORA3A-201ENST00000364113 130 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 MIR19A-201ENST00000384878 82 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 MIR95-201ENST00000385072 81 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 RNU2-8P-201ENST00000410727 190 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 RNU6-387P-201ENST00000411331 105 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC009518.2-201ENST00000418056 731 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC093106.2-201ENST00000428212 385 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 MTND1P20-201ENST00000430341 950 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC009961.2-201ENST00000435771 251 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC245102.2-201ENST00000448956 180 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 KATNBL1P6-201ENST00000453433 915 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AL162395.1-201ENST00000457882 422 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC006199.1-201ENST00000548728 219 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 ROCK1P1-201ENST00000573767 549 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AL355598.1-201ENST00000604169 202 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC008945.2-201ENST00000606056 604 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC130324.3-201ENST00000614165 542 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 RNU1-62P-201ENST00000362599 164 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 RNU6-778P-201ENST00000363269 103 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 Y_RNA.169-201ENST00000363745 96 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 RNU6-188P-201ENST00000364207 107 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 SMIM11P1-201ENST00000369586 178 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 SNORA75B-201ENST00000384053 137 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 Y_RNA.560-201ENST00000384689 102 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 RPL23AP32-201ENST00000395315 459 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AL512604.1-201ENST00000404812 257 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 ELOCP4-201ENST00000420090 333 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 BTF3P15-201ENST00000455606 336 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 KLF3P2-201ENST00000465138 268 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC027575.1-201ENST00000481064 460 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 MTND5P9-201ENST00000503854 1755 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 SNORD27.1-201ENST00000516319 72 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 RNU6-201P-201ENST00000517100 61 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AP003072.2-201ENST00000527756 676 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 MIR3682-201ENST00000581338 84 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AL096840.1-201ENST00000603287 93 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 MTCYBP22-201ENST00000603788 447 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC068276.1-201ENST00000605793 379 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC087683.2-201ENST00000611384 326 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 MIR8087-201ENST00000612745 78 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC131159.1-201ENST00000621854 213 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AP002791.1-201ENST00000623291 381 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 AC112204.3-201ENST00000623822 332 ntBASIC0.86□□□□□ -2.27
COL6A6A6NMZ7 SNORA38-201ENST00000363946 132 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RNU6-1280P-201ENST00000365211 107 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 Y_RNA.390-201ENST00000383932 102 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 Y_RNA.534-201ENST00000384599 112 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RNU2-7P-201ENST00000410794 178 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC127391.1-201ENST00000411737 98 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 MTND2P18-201ENST00000419962 1030 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC244636.1-201ENST00000421152 228 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 MTND4P20-201ENST00000424125 869 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms