Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNA5SP219-201ENST00000390940 113 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.24□□□□□ -2.05
MT-ND1P03886 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.24□□□□□ -2.05
MT-ND1P03886 RNU6-1148P-201ENST00000410992 104 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 POLHP1-201ENST00000411806 470 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 MTND1P23-201ENST00000416931 372 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AC003685.2-201ENST00000422795 395 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AC063976.3-201ENST00000426849 329 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 MTND1P2-201ENST00000430604 821 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.24□□□□□ -2.05
MT-ND1P03886 ERLEC1P1-201ENST00000433806 578 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.24□□□□□ -2.05
MT-ND1P03886 AC004383.1-201ENST00000438135 289 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.24□□□□□ -2.05
MT-ND1P03886 BTF3P15-201ENST00000455606 336 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 RNU6-1208P-201ENST00000459588 107 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 HMGN2P26-201ENST00000463169 339 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AC117503.1-201ENST00000472241 394 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 RPL23AP45-201ENST00000476406 468 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AC083904.1-201ENST00000487828 231 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AC091885.1-201ENST00000506658 268 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AC116655.1-201ENST00000508324 901 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.24□□□□□ -2.05
MT-ND1P03886 AL117351.2-201ENST00000513571 157 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 Y_RNA.665-201ENST00000516177 98 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.24□□□□□ -2.05
MT-ND1P03886 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AL133241.1-201ENST00000556832 487 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AC234778.2-201ENST00000566241 354 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 VN1R80P-201ENST00000597126 338 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AC123912.5-201ENST00000605470 343 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
MT-ND1P03886 AC245884.12-201ENST00000615364 59 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AC024581.2-201ENST00000619986 252 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 U4.3-201ENST00000621047 82 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 AC244517.12-201ENST00000623581 663 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.24□□□□□ -2.05
MT-ND1P03886 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
MT-ND1P03886 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.24□□□□□ -2.05
MT-ND1P03886 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
MT-ND1P03886 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
MT-ND1P03886 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MT-ND1P03886 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.23□□□□□ -2.05
MT-ND1P03886 RNU6-942P-201ENST00000363002 107 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 RNU6-7-201ENST00000364784 107 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 RNA5SP125-201ENST00000364843 120 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 RNU6-8-201ENST00000365467 107 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 RNU6-72P-201ENST00000384285 79 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 Y_RNA.573-201ENST00000384763 105 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.23□□□□□ -2.05
MT-ND1P03886 MRPS10P2-201ENST00000431226 381 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND1P03886 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.23□□□□□ -2.05
MT-ND1P03886 AC011753.1-201ENST00000451001 220 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND1P03886 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.23□□□□□ -2.05
MT-ND1P03886 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND1P03886 RPL36AP48-201ENST00000485521 314 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 HMGB1P30-201ENST00000492455 606 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.23□□□□□ -2.05
MT-ND1P03886 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND1P03886 HMGB3P3-201ENST00000510526 400 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND1P03886 RN7SKP24-201ENST00000515888 284 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 RNA5SP320-201ENST00000516263 124 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 Y_RNA.687-201ENST00000516558 91 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 ACA59.2-201ENST00000517061 156 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND1P03886 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND1P03886 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND1P03886 BNIP3P25-201ENST00000596023 559 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AC092747.3-201ENST00000603769 301 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 CTHRC1P1-201ENST00000605383 469 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AC087045.1-201ENST00000605856 382 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 U2.17-201ENST00000611454 95 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AC103705.1-201ENST00000619013 241 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 AC138627.2-201ENST00000624202 601 ntBASIC2.23□□□□□ -2.05
MT-ND1P03886 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
MT-ND1P03886 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
MT-ND1P03886 RNU6-82P-201ENST00000363970 107 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 RNU6-266P-201ENST00000364225 107 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 U3.12-201ENST00000364498 214 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
MT-ND1P03886 Y_RNA.390-201ENST00000383932 102 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
MT-ND1P03886 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.22□□□□□ -2.05
MT-ND1P03886 COTL1P1-201ENST00000422309 375 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.22□□□□□ -2.05
MT-ND1P03886 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.22□□□□□ -2.05
MT-ND1P03886 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.22□□□□□ -2.05
MT-ND1P03886 CALM1P1-201ENST00000442082 433 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 AC096576.1-201ENST00000489014 359 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.22□□□□□ -2.05
MT-ND1P03886 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.22□□□□□ -2.05
MT-ND1P03886 Y_RNA.654-201ENST00000497848 106 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 RNU6-189P-201ENST00000516120 101 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.22□□□□□ -2.05
MT-ND1P03886 AC023050.3-201ENST00000541142 333 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms