Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DUXAP5-201ENST00000529668 529 ntBASIC1.84□□□□□ -2.11
SSR1P43307 AC022878.1-201ENST00000530684 149 ntBASIC1.84□□□□□ -2.11
SSR1P43307 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.84□□□□□ -2.11
SSR1P43307 AC022254.1-201ENST00000567857 235 ntBASIC1.84□□□□□ -2.11
SSR1P43307 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.84□□□□□ -2.11
SSR1P43307 AC012065.4-201ENST00000602445 679 ntBASIC1.84□□□□□ -2.11
SSR1P43307 AL138889.2-201ENST00000603883 242 ntBASIC1.84□□□□□ -2.11
SSR1P43307 AL359999.1-201ENST00000604513 294 ntBASIC1.84□□□□□ -2.11
SSR1P43307 AL139286.2-201ENST00000606838 396 ntBASIC1.84□□□□□ -2.11
SSR1P43307 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.84□□□□□ -2.11
SSR1P43307 AL133173.2-201ENST00000614270 90 ntBASIC1.84□□□□□ -2.11
SSR1P43307 AC093648.1-201ENST00000623546 606 ntBASIC1.84□□□□□ -2.11
SSR1P43307 MIR3529-201ENST00000637713 78 ntBASIC1.84□□□□□ -2.11
SSR1P43307 RNU6-1010P-201ENST00000362757 107 ntBASIC1.83□□□□□ -2.12
SSR1P43307 RNU6-116P-201ENST00000384042 109 ntBASIC1.83□□□□□ -2.12
SSR1P43307 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
SSR1P43307 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.83□□□□□ -2.12
SSR1P43307 AL137159.1-201ENST00000452808 512 ntBASIC1.83□□□□□ -2.12
SSR1P43307 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.83□□□□□ -2.12
SSR1P43307 AP000763.2-201ENST00000540641 163 ntBASIC1.83□□□□□ -2.12
SSR1P43307 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.83□□□□□ -2.12
SSR1P43307 AC009094.1-201ENST00000564443 426 ntBASIC1.83□□□□□ -2.12
SSR1P43307 AL451064.1-201ENST00000607718 471 ntBASIC1.83□□□□□ -2.12
SSR1P43307 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.83□□□□□ -2.12
SSR1P43307 AC131159.1-201ENST00000621854 213 ntBASIC1.83□□□□□ -2.12
SSR1P43307 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SSR1P43307 SNORD114-1-201ENST00000362705 72 ntBASIC1.82□□□□□ -2.12
SSR1P43307 RNU6-169P-201ENST00000365336 107 ntBASIC1.82□□□□□ -2.12
SSR1P43307 Y_RNA.576-201ENST00000384781 102 ntBASIC1.82□□□□□ -2.12
SSR1P43307 RPL23AP32-201ENST00000395315 459 ntBASIC1.82□□□□□ -2.12
SSR1P43307 AC074117.2-201ENST00000417130 397 ntBASIC1.82□□□□□ -2.12
SSR1P43307 ISCA1P6-201ENST00000427740 390 ntBASIC1.82□□□□□ -2.12
SSR1P43307 MED13P1-201ENST00000428342 171 ntBASIC1.82□□□□□ -2.12
SSR1P43307 KATNBL1P3-201ENST00000443475 909 ntBASIC1.82□□□□□ -2.12
SSR1P43307 AC104564.1-201ENST00000493028 407 ntBASIC1.82□□□□□ -2.12
SSR1P43307 AC005178.1-201ENST00000508392 440 ntBASIC1.82□□□□□ -2.12
SSR1P43307 NDUFA5P6-201ENST00000542110 379 ntBASIC1.82□□□□□ -2.12
SSR1P43307 CR383656.8-201ENST00000549046 145 ntBASIC1.82□□□□□ -2.12
SSR1P43307 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.82□□□□□ -2.12
SSR1P43307 MIR8081-201ENST00000611533 95 ntBASIC1.82□□□□□ -2.12
SSR1P43307 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
SSR1P43307 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SSR1P43307 ZNF355P-201ENST00000427301 3216 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SSR1P43307 RNU6-655P-201ENST00000362858 107 ntBASIC1.81□□□□□ -2.12
SSR1P43307 RNU6-1303P-201ENST00000364841 107 ntBASIC1.81□□□□□ -2.12
SSR1P43307 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SSR1P43307 MIR1294-201ENST00000408503 142 ntBASIC1.81□□□□□ -2.12
SSR1P43307 MIR1283-2-201ENST00000408621 87 ntBASIC1.81□□□□□ -2.12
SSR1P43307 POLHP1-201ENST00000411806 470 ntBASIC1.81□□□□□ -2.12
SSR1P43307 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.81□□□□□ -2.12
SSR1P43307 HIGD1AP15-201ENST00000416198 280 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AC137499.1-201ENST00000427602 88 ntBASIC1.81□□□□□ -2.12
SSR1P43307 HMGN2P3-201ENST00000433603 273 ntBASIC1.81□□□□□ -2.12
SSR1P43307 HMGN2P5-201ENST00000436882 273 ntBASIC1.81□□□□□ -2.12
SSR1P43307 MTND2P29-201ENST00000438595 412 ntBASIC1.81□□□□□ -2.12
SSR1P43307 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.81□□□□□ -2.12
SSR1P43307 AL357134.1-201ENST00000445848 426 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AL122001.1-201ENST00000457027 370 ntBASIC1.81□□□□□ -2.12
SSR1P43307 PRELID3BP1-201ENST00000457142 540 ntBASIC1.81□□□□□ -2.12
SSR1P43307 MTCO2P29-201ENST00000465212 189 ntBASIC1.81□□□□□ -2.12
SSR1P43307 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.81□□□□□ -2.12
SSR1P43307 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.81□□□□□ -2.12
SSR1P43307 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.81□□□□□ -2.12
SSR1P43307 FAM206BP-201ENST00000510179 541 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.81□□□□□ -2.12
SSR1P43307 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.81□□□□□ -2.12
SSR1P43307 AL356057.1-201ENST00000533798 831 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.81□□□□□ -2.12
SSR1P43307 MIR4513-201ENST00000581077 86 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AC016925.2-201ENST00000605108 242 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AC009318.2-201ENST00000610917 651 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AC104073.3-201ENST00000610942 955 ntBASIC1.81□□□□□ -2.12
SSR1P43307 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AC026585.1-201ENST00000619582 524 ntBASIC1.81□□□□□ -2.12
SSR1P43307 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.8□□□□□ -2.12
SSR1P43307 MTCYBP5-201ENST00000423752 1135 ntBASIC1.8□□□□□ -2.12
SSR1P43307 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.8□□□□□ -2.12
SSR1P43307 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.8□□□□□ -2.12
SSR1P43307 AL022238.1-201ENST00000442557 355 ntBASIC1.8□□□□□ -2.12
SSR1P43307 AL162395.1-201ENST00000457882 422 ntBASIC1.8□□□□□ -2.12
SSR1P43307 AC117503.1-201ENST00000472241 394 ntBASIC1.8□□□□□ -2.12
SSR1P43307 MTCYBP35-201ENST00000503630 1137 ntBASIC1.8□□□□□ -2.12
SSR1P43307 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.8□□□□□ -2.12
SSR1P43307 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.8□□□□□ -2.12
SSR1P43307 AC008015.1-201ENST00000555505 465 ntBASIC1.8□□□□□ -2.12
SSR1P43307 AC104581.2-201ENST00000572227 430 ntBASIC1.8□□□□□ -2.12
SSR1P43307 AL161722.3-201ENST00000605789 2983 ntBASIC1.8□□□□□ -2.12
SSR1P43307 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.8□□□□□ -2.12
SSR1P43307 AC007494.3-201ENST00000624660 743 ntBASIC1.8□□□□□ -2.12
SSR1P43307 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SSR1P43307 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.79□□□□□ -2.12
SSR1P43307 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SSR1P43307 AL356292.1-201ENST00000283110 373 ntBASIC1.79□□□□□ -2.12
SSR1P43307 RNU6-78P-201ENST00000362897 107 ntBASIC1.79□□□□□ -2.12
SSR1P43307 RNA5SP363-201ENST00000365072 115 ntBASIC1.79□□□□□ -2.12
SSR1P43307 SNORA72.3-201ENST00000365074 132 ntBASIC1.79□□□□□ -2.12
SSR1P43307 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.79□□□□□ -2.12
SSR1P43307 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms