Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RNA5SP137-201ENST00000516833 135 ntBASIC2.06□□□□□ -2.08
RFC4P35249 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.06□□□□□ -2.08
RFC4P35249 MIR3618-201ENST00000580330 88 ntBASIC2.06□□□□□ -2.08
RFC4P35249 DEFB131E-202ENST00000602581 683 ntBASIC2.06□□□□□ -2.08
RFC4P35249 SEPT7P9-203ENST00000604116 343 ntBASIC2.06□□□□□ -2.08
RFC4P35249 MIR6504-201ENST00000613520 61 ntBASIC2.06□□□□□ -2.08
RFC4P35249 AL133173.2-201ENST00000614270 90 ntBASIC2.06□□□□□ -2.08
RFC4P35249 AC024940.5-201ENST00000622889 474 ntBASIC2.06□□□□□ -2.08
RFC4P35249 AC091931.1-201ENST00000623488 728 ntBASIC2.06□□□□□ -2.08
RFC4P35249 AP000770.2-201ENST00000623694 100 ntBASIC2.06□□□□□ -2.08
RFC4P35249 AC120349.3-201ENST00000624377 529 ntBASIC2.06□□□□□ -2.08
RFC4P35249 ZNF702P-202ENST00000434269 1966 ntBASIC2.06□□□□□ -2.08
RFC4P35249 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RFC4P35249 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RFC4P35249 SNORA7.1-201ENST00000363750 139 ntBASIC2.05□□□□□ -2.08
RFC4P35249 RNU6-641P-201ENST00000384006 107 ntBASIC2.05□□□□□ -2.08
RFC4P35249 SNORA67.6-201ENST00000391093 99 ntBASIC2.05□□□□□ -2.08
RFC4P35249 SNORA40C-201ENST00000391285 128 ntBASIC2.05□□□□□ -2.08
RFC4P35249 RPS3AP36-201ENST00000398190 775 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AL356432.1-201ENST00000405809 419 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AL160275.3-201ENST00000423876 471 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.05□□□□□ -2.08
RFC4P35249 AL513185.2-201ENST00000425543 193 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.05□□□□□ -2.08
RFC4P35249 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.05□□□□□ -2.08
RFC4P35249 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AL353689.1-201ENST00000438895 199 ntBASIC2.05□□□□□ -2.08
RFC4P35249 MTND6P13-201ENST00000443510 523 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AL078601.1-201ENST00000444542 271 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.05□□□□□ -2.08
RFC4P35249 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.05□□□□□ -2.08
RFC4P35249 BTF3P15-201ENST00000455606 336 ntBASIC2.05□□□□□ -2.08
RFC4P35249 MTCO2P29-201ENST00000465212 189 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AC023194.1-201ENST00000493084 308 ntBASIC2.05□□□□□ -2.08
RFC4P35249 MTND1P22-201ENST00000510572 951 ntBASIC2.05□□□□□ -2.08
RFC4P35249 ACA59.2-201ENST00000517061 156 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.05□□□□□ -2.08
RFC4P35249 AL031274.2-201ENST00000599419 203 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.05□□□□□ -2.08
RFC4P35249 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AC008250.2-201ENST00000615261 205 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AC009233.1-201ENST00000616477 371 ntBASIC2.05□□□□□ -2.08
RFC4P35249 DUXAP9-208ENST00000622815 614 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AC103710.2-202ENST00000641454 2853 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AC233981.2-201ENST00000611524 1614 ntBASIC2.05□□□□□ -2.08
RFC4P35249 CDC27P3-201ENST00000635418 1910 ntBASIC2.05□□□□□ -2.08
RFC4P35249 AP000568.1-201ENST00000282964 442 ntBASIC2.04□□□□□ -2.08
RFC4P35249 U8.3-201ENST00000363321 132 ntBASIC2.04□□□□□ -2.08
RFC4P35249 SNORA20.2-201ENST00000383922 131 ntBASIC2.04□□□□□ -2.08
RFC4P35249 SNORA24.1-201ENST00000384401 135 ntBASIC2.04□□□□□ -2.08
RFC4P35249 MIR518D-201ENST00000385014 87 ntBASIC2.04□□□□□ -2.08
RFC4P35249 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RFC4P35249 CISD1P1-201ENST00000393907 327 ntBASIC2.04□□□□□ -2.08
RFC4P35249 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.04□□□□□ -2.08
RFC4P35249 RPS3AP3-201ENST00000411933 242 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AC016831.2-201ENST00000417179 352 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.04□□□□□ -2.08
RFC4P35249 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.04□□□□□ -2.08
RFC4P35249 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.04□□□□□ -2.08
RFC4P35249 RPS24P1-201ENST00000438550 371 ntBASIC2.04□□□□□ -2.08
RFC4P35249 RPS15AP9-201ENST00000439856 381 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AL161788.1-201ENST00000441805 169 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.04□□□□□ -2.08
RFC4P35249 RPL23AP6-201ENST00000446637 472 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.04□□□□□ -2.08
RFC4P35249 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.04□□□□□ -2.08
RFC4P35249 AL583843.1-201ENST00000456070 346 ntBASIC2.04□□□□□ -2.08
RFC4P35249 TOMM22P6-201ENST00000465035 409 ntBASIC2.04□□□□□ -2.08
RFC4P35249 RBBP4P6-201ENST00000508098 202 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.04□□□□□ -2.08
RFC4P35249 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.04□□□□□ -2.08
RFC4P35249 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.04□□□□□ -2.08
RFC4P35249 AC135279.1-201ENST00000543493 504 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.04□□□□□ -2.08
RFC4P35249 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.04□□□□□ -2.08
RFC4P35249 AC145350.1-201ENST00000567426 208 ntBASIC2.04□□□□□ -2.08
RFC4P35249 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AC243960.4-201ENST00000600532 288 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AL451064.1-201ENST00000607718 471 ntBASIC2.04□□□□□ -2.08
RFC4P35249 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RFC4P35249 AL603755.1-201ENST00000619504 163 ntBASIC2.04□□□□□ -2.08
RFC4P35249 AL603839.4-201ENST00000624658 1005 ntBASIC2.04□□□□□ -2.08
RFC4P35249 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
RFC4P35249 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.04□□□□□ -2.08
RFC4P35249 TEX21P-201ENST00000447107 1476 ntBASIC2.03□□□□□ -2.08
RFC4P35249 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.03□□□□□ -2.08
RFC4P35249 Y_RNA.22-201ENST00000362492 102 ntBASIC2.03□□□□□ -2.08
RFC4P35249 RNU4-21P-201ENST00000362802 126 ntBASIC2.03□□□□□ -2.08
RFC4P35249 SNORD3E-201ENST00000362899 217 ntBASIC2.03□□□□□ -2.08
RFC4P35249 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RFC4P35249 Y_RNA.466-201ENST00000384294 113 ntBASIC2.03□□□□□ -2.08
RFC4P35249 MIR558-201ENST00000384920 94 ntBASIC2.03□□□□□ -2.08
RFC4P35249 SNORA40.19-201ENST00000390846 128 ntBASIC2.03□□□□□ -2.08
RFC4P35249 SNORA26.8-201ENST00000391306 124 ntBASIC2.03□□□□□ -2.08
RFC4P35249 RNU2-39P-201ENST00000410604 198 ntBASIC2.03□□□□□ -2.08
RFC4P35249 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.03□□□□□ -2.08
RFC4P35249 AL353706.1-201ENST00000436728 494 ntBASIC2.03□□□□□ -2.08
RFC4P35249 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.03□□□□□ -2.08
RFC4P35249 snoU109.2-201ENST00000459316 135 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms