Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AL022154.1-201ENST00000604698 785 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 MIR15A-201ENST00000607334 83 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 FRG1KP-201ENST00000623592 341 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC004808.1-201ENST00000627671 721 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC010149.2-201ENST00000637608 315 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC002543.1-201ENST00000299783 1954 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
VCX3BQ9H321 Y_RNA.46-201ENST00000362695 102 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 RNU6-1210P-201ENST00000363775 107 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 RNU5E-6P-201ENST00000365574 115 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 RNU6-72P-201ENST00000384285 79 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 Y_RNA.623-201ENST00000411128 95 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.02□□□□□ -2.25
VCX3BQ9H321 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.02□□□□□ -2.25
VCX3BQ9H321 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.02□□□□□ -2.25
VCX3BQ9H321 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.02□□□□□ -2.25
VCX3BQ9H321 MTND3P1-201ENST00000441336 220 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 AC012308.1-201ENST00000451232 178 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VCX3BQ9H321 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.02□□□□□ -2.25
VCX3BQ9H321 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.02□□□□□ -2.25
VCX3BQ9H321 AC119751.4-201ENST00000507498 357 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 AC117532.1-201ENST00000514638 323 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 RNU1-92P-201ENST00000517017 135 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 RNA5SP404-201ENST00000517118 132 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.02□□□□□ -2.25
VCX3BQ9H321 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VCX3BQ9H321 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.02□□□□□ -2.25
VCX3BQ9H321 AC012065.4-201ENST00000602445 679 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 WISP1-OT1-201ENST00000602893 642 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 AL645939.4-201ENST00000604495 135 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 BNIP3P31-201ENST00000604515 566 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.02□□□□□ -2.25
VCX3BQ9H321 MIR8063-201ENST00000621930 81 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 AC093648.1-201ENST00000623546 606 ntBASIC1.02□□□□□ -2.25
VCX3BQ9H321 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
VCX3BQ9H321 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
VCX3BQ9H321 RNY4P24-201ENST00000362735 96 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 RNU4-92P-201ENST00000363783 136 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 RNU6-946P-201ENST00000383878 107 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 RNU2-23P-201ENST00000410545 195 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 RNU2-62P-201ENST00000410868 191 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 AC104058.1-201ENST00000448028 297 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 RPL23AP35-201ENST00000451906 501 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.01□□□□□ -2.25
VCX3BQ9H321 snoU13.14-201ENST00000459372 104 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.01□□□□□ -2.25
VCX3BQ9H321 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.01□□□□□ -2.25
VCX3BQ9H321 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.01□□□□□ -2.25
VCX3BQ9H321 AC023050.2-201ENST00000544968 387 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.01□□□□□ -2.25
VCX3BQ9H321 AL161670.1-201ENST00000554348 137 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 AC136932.1-201ENST00000574771 208 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 AC023043.2-201ENST00000589678 1026 ntBASIC1.01□□□□□ -2.25
VCX3BQ9H321 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.01□□□□□ -2.25
VCX3BQ9H321 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
VCX3BQ9H321 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
VCX3BQ9H321 AL391516.1-201ENST00000554380 2449 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1□□□□□ -2.25
VCX3BQ9H321 MIR412-201ENST00000362142 91 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 SNORD33-201ENST00000362761 85 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 U8.2-201ENST00000363156 134 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 RNU4-68P-201ENST00000364314 141 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 RNU6-26P-201ENST00000383985 107 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 SNORA29-201ENST00000384183 140 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 SNORA67.5-201ENST00000391036 107 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 UBE2V1P2-201ENST00000397758 440 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 RSL24D1P4-201ENST00000400938 484 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 CBX3P9-201ENST00000402326 552 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1□□□□□ -2.25
VCX3BQ9H321 AC139712.2-201ENST00000424302 339 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1□□□□□ -2.25
VCX3BQ9H321 AL008629.1-201ENST00000438615 184 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 CALM1P1-201ENST00000442082 433 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 AL022238.1-201ENST00000442557 355 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1□□□□□ -2.25
VCX3BQ9H321 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1□□□□□ -2.25
VCX3BQ9H321 RNVU1-2-201ENST00000516326 135 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 RNU6-965P-201ENST00000516721 96 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 MTATP6P15-201ENST00000527233 835 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1□□□□□ -2.25
VCX3BQ9H321 AC123904.2-201ENST00000548059 300 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 CR383656.8-201ENST00000549046 145 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 MIR4307-201ENST00000582802 84 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 AC174048.1-201ENST00000603389 144 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 AL158042.1-201ENST00000605338 460 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 AC144521.1-201ENST00000607148 956 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 AL355816.2-201ENST00000610049 647 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 AC024940.5-201ENST00000622889 474 ntBASIC1□□□□□ -2.25
VCX3BQ9H321 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1□□□□□ -2.25
VCX3BQ9H321 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1□□□□□ -2.25
VCX3BQ9H321 SNORD114-1-201ENST00000362705 72 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 RNU1-22P-201ENST00000363334 158 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 RNU6-960P-201ENST00000364056 120 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 SNORD1A-201ENST00000364968 72 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 Y_RNA.510-201ENST00000384511 114 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 SNORD116-20-201ENST00000384529 92 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 MIR10A-201ENST00000385043 110 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms