Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SNORD56.5-201ENST00000364281 72 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 Y_RNA.301-201ENST00000364990 103 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 SNORA9.2-201ENST00000365361 133 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 RNU6-198P-201ENST00000384258 104 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 MIR10A-201ENST00000385043 110 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 RNU2-41P-201ENST00000410991 178 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AC063976.3-201ENST00000426849 329 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AL109933.2-201ENST00000452651 260 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 RNU7-23P-201ENST00000459465 62 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 RNU7-138P-201ENST00000459479 64 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 RPL7P43-201ENST00000478876 753 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 RPS29P20-201ENST00000489592 171 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AC069113.1-201ENST00000517763 267 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 MIR3942-201ENST00000585264 109 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AC091135.1-201ENST00000585943 307 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AC020895.1-201ENST00000595362 272 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AC024153.1-201ENST00000603103 365 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 APOOP1-201ENST00000604695 592 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AC087045.1-201ENST00000605856 382 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 MIR6134-201ENST00000617606 109 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 Z69720.2-201ENST00000624755 279 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 AC110491.1-201ENST00000562191 2010 ntBASIC3.1□□□□□ -1.91
VPS52Q8N1B4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VPS52Q8N1B4 Y_RNA.135-201ENST00000363439 95 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 MIR34A-201ENST00000385130 110 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 RNU6-1009P-201ENST00000390996 107 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 RPL21P75-201ENST00000396599 483 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 MIR450B-201ENST00000401182 78 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 RPL21P28-201ENST00000401418 483 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 AL356057.2-201ENST00000403318 432 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 RNU2-25P-201ENST00000411041 191 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS52Q8N1B4 RPL21P39-201ENST00000463605 483 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 AP004217.1-201ENST00000480579 346 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 AC087190.1-201ENST00000484462 480 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 AC093591.1-201ENST00000491435 481 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 RPL21P16-201ENST00000495531 483 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS52Q8N1B4 RNU6-256P-201ENST00000516747 97 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 RNU7-30P-201ENST00000516835 62 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 AC087854.1-201ENST00000519706 414 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 LINC00933-203ENST00000559812 219 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 MIR3124-201ENST00000582636 67 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS52Q8N1B4 MIR3672-201ENST00000584290 82 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 HMGN2P15-201ENST00000585707 270 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 MTND4LP5-201ENST00000605152 292 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.09□□□□□ -1.91
VPS52Q8N1B4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
VPS52Q8N1B4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
VPS52Q8N1B4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 Y_RNA.263-201ENST00000364659 114 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 RNU6-1013P-201ENST00000384180 107 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 RNU6-72P-201ENST00000384285 79 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 RAP1BP3-201ENST00000407180 549 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 VN1R36P-201ENST00000414936 291 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 HMGN2P10-201ENST00000448085 265 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 AMD1P1-201ENST00000457220 922 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 AC128713.1-201ENST00000471495 306 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 AC079600.2-201ENST00000550076 130 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 AC026464.5-201ENST00000562497 722 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 AC023043.2-201ENST00000589678 1026 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 AC005498.1-201ENST00000592125 465 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 uc_338.5-201ENST00000611839 155 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 AL138726.1-201ENST00000614873 333 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 CDC27P3-201ENST00000635418 1910 ntBASIC3.08□□□□□ -1.92
VPS52Q8N1B4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS52Q8N1B4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AC008669.1-201ENST00000565823 2178 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
VPS52Q8N1B4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS52Q8N1B4 RNU4-82P-201ENST00000362443 140 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS52Q8N1B4 MIR887-201ENST00000401258 79 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AL356432.1-201ENST00000405809 419 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AL096701.2-201ENST00000416920 238 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AL365496.1-201ENST00000426885 215 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AL365400.1-201ENST00000431854 640 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AL359672.1-201ENST00000442302 409 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms