Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MTND3P9-201ENST00000429526 346 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-612P-201ENST00000516909 102 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-988P-201ENST00000519081 107 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 AP005902.1-201ENST00000521358 186 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 AP000867.2-201ENST00000532468 320 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 HMGN2P15-201ENST00000585707 270 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 MIR148B-201ENST00000362252 99 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 Y_RNA.148-201ENST00000363557 117 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 RNU1-100P-201ENST00000365255 165 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 Y_RNA.422-201ENST00000384054 114 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-1160P-201ENST00000384546 104 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 BPY2DP-201ENST00000422208 265 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AC005300.1-201ENST00000428401 373 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AC104332.2-201ENST00000429959 156 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AC091390.1-201ENST00000433904 331 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 CYCSP32-201ENST00000440548 321 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AC010099.1-201ENST00000455434 375 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-264P-201ENST00000517134 104 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 CBX3P8-201ENST00000532412 525 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 NACAP3-201ENST00000552100 481 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 VN1R85P-201ENST00000601587 426 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AC024153.1-201ENST00000603103 365 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AC097372.5-201ENST00000623665 376 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 AC073476.4-201ENST00000628409 72 ntBASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCHD4Q6ZW05 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 U3.6-201ENST00000363622 211 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-105P-201ENST00000363909 104 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 Y_RNA.252-201ENST00000364556 101 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 SNORA63C-201ENST00000364578 129 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 Y_RNA.496-201ENST00000384444 101 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-738P-201ENST00000384531 106 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 RPS29P13-201ENST00000402041 169 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 RAB9AP3-201ENST00000412737 573 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AL353997.1-201ENST00000432936 108 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AC011816.1-201ENST00000441346 546 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 RAB9AP1-201ENST00000449393 573 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AC006026.2-201ENST00000457376 180 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 RN7SL601P-201ENST00000471221 293 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AC068781.1-201ENST00000488231 618 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 RPL23AP49-201ENST00000492925 468 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AC022447.4-201ENST00000504053 364 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-581P-201ENST00000516214 105 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-1045P-201ENST00000516321 107 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-56P-201ENST00000516986 93 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AC010186.2-204ENST00000537668 439 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AC116312.1-201ENST00000606841 314 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AL355802.3-201ENST00000607571 545 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AC107294.3-201ENST00000609211 526 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 MIR8076-201ENST00000611401 83 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 AC007485.1-201ENST00000616755 206 ntBASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.09□□□□□ -1.91
PTCHD4Q6ZW05 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
PTCHD4Q6ZW05 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
PTCHD4Q6ZW05 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.92
PTCHD4Q6ZW05 CDC27P3-201ENST00000635418 1910 ntBASIC3.09□□□□□ -1.92
PTCHD4Q6ZW05 MTND4P1-201ENST00000457501 1466 ntBASIC3.09□□□□□ -1.92
PTCHD4Q6ZW05 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.09□□□□□ -1.92
PTCHD4Q6ZW05 AC110491.1-201ENST00000562191 2010 ntBASIC3.09□□□□□ -1.92
PTCHD4Q6ZW05 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 RNU6-527P-201ENST00000363425 104 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 RNU6-639P-201ENST00000384074 107 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AL591034.2-201ENST00000402839 359 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 MCFD2P1-201ENST00000417812 300 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AL445584.1-201ENST00000431451 330 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AL160004.2-201ENST00000432935 350 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 HMGN2P10-201ENST00000448085 265 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 SNORA31.18-201ENST00000517043 134 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AC021739.1-201ENST00000559631 174 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms