Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC092634.6-201ENST00000418558 192 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.15□□□□□ -2.39
CNOT1A5YKK6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.15□□□□□ -2.39
CNOT1A5YKK6 RPL31P3-201ENST00000458430 332 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 AC002350.1-201ENST00000490759 375 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 AC111000.5-201ENST00000506559 1178 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 AC074344.1-201ENST00000512823 224 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 MTCO2P2-201ENST00000591258 225 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 AC073410.2-201ENST00000603240 332 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 AC092354.1-201ENST00000606057 376 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 AC092953.2-201ENST00000608000 699 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 AC090772.4-201ENST00000623599 362 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 MTND4P14-201ENST00000435799 1354 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CNOT1A5YKK6 RNU6-611P-201ENST00000384276 104 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.14□□□□□ -2.39
CNOT1A5YKK6 RPL26P6-201ENST00000440913 438 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.14□□□□□ -2.39
CNOT1A5YKK6 AC067904.2-201ENST00000517322 1283 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 AC124947.2-202ENST00000552735 133 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.14□□□□□ -2.39
CNOT1A5YKK6 AL158163.2-201ENST00000619110 700 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 SNORD114-31-201ENST00000363219 75 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 RNU6-654P-201ENST00000364373 107 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 RPL22P22-201ENST00000395439 379 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 RPL36AP53-201ENST00000432891 316 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.14□□□□□ -2.39
CNOT1A5YKK6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.14□□□□□ -2.39
CNOT1A5YKK6 uc_338.34-201ENST00000617467 174 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 MIR198-201ENST00000637333 62 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 MTND4P16-201ENST00000466108 1367 ntBASIC0.14□□□□□ -2.39
CNOT1A5YKK6 RNU4-12P-201ENST00000365233 139 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC027119.1-201ENST00000440877 241 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.13□□□□□ -2.39
CNOT1A5YKK6 MEMO1P3-201ENST00000459811 302 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 RNU4-54P-201ENST00000516428 129 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 IGKV1-22-201ENST00000524313 326 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC026371.1-201ENST00000551867 419 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC093913.1-201ENST00000614178 329 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC123767.1-202ENST00000620407 817 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC009318.4-201ENST00000620496 486 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 MIR302D-201ENST00000362275 68 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 RNY3P5-201ENST00000384127 102 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 RNU6-1237P-201ENST00000384777 107 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC112771.1-201ENST00000463581 102 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 SNORA31.17-201ENST00000516953 127 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC124293.1-201ENST00000530034 493 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AC004775.1-201ENST00000607389 753 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 AL365434.2-201ENST00000607979 234 ntBASIC0.13□□□□□ -2.39
CNOT1A5YKK6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CNOT1A5YKK6 RNA5SP100-201ENST00000410903 110 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 RNA5SP59-201ENST00000410922 110 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 USP9YP19-201ENST00000412165 485 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 USP9YP13-201ENST00000417797 480 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 PAXBP1P1-201ENST00000449315 447 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 RNU6-567P-201ENST00000516746 107 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC105129.3-201ENST00000605455 485 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 Y_RNA.100-201ENST00000363141 102 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 SNORD14D-201ENST00000384390 87 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 RNU6-910P-201ENST00000390844 107 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 BTF3P8-201ENST00000414577 526 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 RPP40P1-201ENST00000426762 456 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.12□□□□□ -2.39
CNOT1A5YKK6 RNA5SP134-201ENST00000516492 96 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AL136520.1-202ENST00000555494 763 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC008088.1-201ENST00000580993 280 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC040896.1-201ENST00000613819 479 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC040168.1-201ENST00000623594 991 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 AC009950.2-201ENST00000636548 183 ntBASIC0.12□□□□□ -2.39
CNOT1A5YKK6 SNORD114-28-201ENST00000363610 72 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 MIR888-201ENST00000401186 77 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 AL591034.2-201ENST00000402839 359 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 AL512844.2-201ENST00000433990 593 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.11□□□□□ -2.39
CNOT1A5YKK6 HSPE1P9-201ENST00000440046 311 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.11□□□□□ -2.39
CNOT1A5YKK6 AL512310.8-201ENST00000550183 120 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 AP001596.2-201ENST00000608410 312 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.11□□□□□ -2.39
CNOT1A5YKK6 RNU6-349P-201ENST00000362402 107 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms