Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC023050.3-201ENST00000541142 333 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC009127.3-201ENST00000570531 403 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 NBR2-204ENST00000587322 63 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC012507.3-201ENST00000603556 477 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC091805.2-201ENST00000603848 235 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AL391646.1-201ENST00000603860 190 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC097372.5-201ENST00000623665 376 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
FOXA2Q9Y261 RNU6-1119P-201ENST00000384349 108 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC068050.1-201ENST00000394891 380 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AL591034.2-201ENST00000402839 359 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 NDUFB4P4-201ENST00000404822 243 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 RNU4-55P-201ENST00000410731 137 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 RNA5SP21-201ENST00000410917 96 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC112220.1-201ENST00000434628 355 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC025750.2-201ENST00000442609 450 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 RPL23AP45-201ENST00000476406 468 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC090525.1-201ENST00000479116 478 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC108078.1-201ENST00000508073 725 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 SNORA31.15-201ENST00000516771 132 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC109479.2-201ENST00000517842 174 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AL137161.1-201ENST00000532231 390 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXA2Q9Y261 IMMP1LP2-201ENST00000552954 492 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 HIF1AP1-201ENST00000553642 175 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXA2Q9Y261 PIGPP4-201ENST00000584447 307 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC025165.5-201ENST00000602802 578 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AL049779.4-201ENST00000604500 156 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 U2.17-201ENST00000611454 95 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AL354950.2-201ENST00000617939 290 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC010297.1-201ENST00000623948 149 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
FOXA2Q9Y261 AC080100.1-201ENST00000624239 5356 ntBASIC2.16□□□□□ -2.06
FOXA2Q9Y261 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
FOXA2Q9Y261 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXA2Q9Y261 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
FOXA2Q9Y261 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
FOXA2Q9Y261 Y_RNA.40-201ENST00000362645 93 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 RNU1-23P-201ENST00000363361 144 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 U3.13-201ENST00000364804 214 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 SNORA25B-201ENST00000365507 128 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 MIR544A-201ENST00000384855 91 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 MTCO2P19-201ENST00000427513 598 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 AC007969.2-201ENST00000441891 191 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 USP9YP8-201ENST00000441913 500 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 RPS3P1-201ENST00000456781 192 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 snoU13.14-201ENST00000459372 104 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 SNORA4.4-201ENST00000515921 135 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 RNU7-193P-201ENST00000516723 65 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 AC004486.1-201ENST00000546846 233 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 EIF4BP1-201ENST00000554881 351 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 RPS3AP23-202ENST00000574601 686 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 MIR3941-201ENST00000582572 103 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 MIR3670-2-201ENST00000582974 65 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 MIR4635-201ENST00000583759 79 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 MIR3670-1-201ENST00000584160 65 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 MIR3670-3-201ENST00000584855 65 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 AC002044.1-201ENST00000606707 158 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 MIR3670-4-201ENST00000612260 65 ntBASIC2.15□□□□□ -2.07
FOXA2Q9Y261 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
FOXA2Q9Y261 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
FOXA2Q9Y261 RNU6-105P-201ENST00000363909 104 ntBASIC2.14□□□□□ -2.07
FOXA2Q9Y261 MIR9-1-201ENST00000385198 89 ntBASIC2.14□□□□□ -2.07
FOXA2Q9Y261 CBX3P9-201ENST00000402326 552 ntBASIC2.14□□□□□ -2.07
FOXA2Q9Y261 EDDM3CP-201ENST00000415977 425 ntBASIC2.14□□□□□ -2.07
FOXA2Q9Y261 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXA2Q9Y261 MTND2P22-201ENST00000444325 1033 ntBASIC2.14□□□□□ -2.07
FOXA2Q9Y261 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.14□□□□□ -2.07
FOXA2Q9Y261 AC027673.1-201ENST00000456245 405 ntBASIC2.14□□□□□ -2.07
FOXA2Q9Y261 TPT1P7-201ENST00000458300 517 ntBASIC2.14□□□□□ -2.07
FOXA2Q9Y261 SRIP1-201ENST00000489235 288 ntBASIC2.14□□□□□ -2.07
FOXA2Q9Y261 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.14□□□□□ -2.07
FOXA2Q9Y261 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.14□□□□□ -2.07
FOXA2Q9Y261 MTND2P33-201ENST00000506452 1031 ntBASIC2.14□□□□□ -2.07
FOXA2Q9Y261 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.14□□□□□ -2.07
FOXA2Q9Y261 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXA2Q9Y261 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.14□□□□□ -2.07
FOXA2Q9Y261 AC069113.1-201ENST00000517763 267 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms