Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm38027-201ENSMUST00000192315 235 ntBASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cr1Q9Z0D9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm12085-201ENSMUST00000119263 940 ntBASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cr1Q9Z0D9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cr1Q9Z0D9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cr1Q9Z0D9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cr1Q9Z0D9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cr1Q9Z0D9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cr1Q9Z0D9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm20049-201ENSMUST00000219950 730 ntBASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cr1Q9Z0D9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms