Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh17Q9R100 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh17Q9R100 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh17Q9R100 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh17Q9R100 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh17Q9R100 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh17Q9R100 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh17Q9R100 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh17Q9R100 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.77■□□□□ 0.12
Cdh17Q9R100 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh17Q9R100 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh17Q9R100 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Cdh17Q9R100 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Cdh17Q9R100 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh17Q9R100 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh17Q9R100 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh17Q9R100 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh17Q9R100 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh17Q9R100 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Cdh17Q9R100 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh17Q9R100 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.75■□□□□ 0.11
Cdh17Q9R100 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh17Q9R100 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.74■□□□□ 0.11
Cdh17Q9R100 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.74■□□□□ 0.11
Cdh17Q9R100 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms