Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Shroom3Q9QXN0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Gm11452-201ENSMUST00000122376 690 ntBASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Gm12895-201ENSMUST00000122214 226 ntBASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom3Q9QXN0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Shroom3Q9QXN0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Shroom3Q9QXN0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Shroom3Q9QXN0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom3Q9QXN0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Gm2651-201ENSMUST00000203560 838 ntBASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Gm12644-201ENSMUST00000119935 606 ntBASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Shroom3Q9QXN0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms