Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim44Q9QXA7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.77■□□□□ 0.6
Trim44Q9QXA7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim44Q9QXA7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim44Q9QXA7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim44Q9QXA7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim44Q9QXA7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim44Q9QXA7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Gm38285-201ENSMUST00000192928 922 ntBASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim44Q9QXA7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms