Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trem1Q9JKE2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trem1Q9JKE2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trem1Q9JKE2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trem1Q9JKE2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trem1Q9JKE2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.55□□□□□ -0.08
Trem1Q9JKE2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trem1Q9JKE2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trem1Q9JKE2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trem1Q9JKE2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trem1Q9JKE2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Mir8112-201ENSMUST00000184382 131 ntBASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Gm42778-201ENSMUST00000199644 553 ntBASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trem1Q9JKE2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Trem1Q9JKE2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Gm29791-202ENSMUST00000207888 369 ntBASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.52□□□□□ -0.09
Trem1Q9JKE2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trem1Q9JKE2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms