Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn3Q9ES97 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn3Q9ES97 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn3Q9ES97 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Gm10819-201ENSMUST00000099988 561 ntBASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rtn3Q9ES97 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Gm7284-201ENSMUST00000131667 944 ntBASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Gm29518-201ENSMUST00000190858 372 ntBASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn3Q9ES97 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn3Q9ES97 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rtn3Q9ES97 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Gm17808-201ENSMUST00000200859 894 ntBASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn3Q9ES97 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn3Q9ES97 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn3Q9ES97 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn3Q9ES97 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn3Q9ES97 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rtn3Q9ES97 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn3Q9ES97 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn3Q9ES97 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn3Q9ES97 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms