Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Gm44430-201ENSMUST00000203376 995 ntBASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf3c6Q9D8P7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf3c6Q9D8P7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Gtf3c6Q9D8P7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gtf3c6Q9D8P7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gtf3c6Q9D8P7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Gtf3c6Q9D8P7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Gtf3c6Q9D8P7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gtf3c6Q9D8P7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.27■□□□□ 0.35
Gtf3c6Q9D8P7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Gm10052-201ENSMUST00000168019 960 ntBASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Gm5587-201ENSMUST00000206270 674 ntBASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Gm7729-201ENSMUST00000050143 801 ntBASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf3c6Q9D8P7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Mir770-201ENSMUST00000103252 94 ntBASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf3c6Q9D8P7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms