Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Gm20760-201ENSMUST00000179197 648 ntBASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp5Q9D7S9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Gm11539-201ENSMUST00000119837 557 ntBASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Gm13168-201ENSMUST00000121771 632 ntBASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp5Q9D7S9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Chmp5Q9D7S9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Gm21814-202ENSMUST00000203277 873 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms