Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4cQ9D7F7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp4cQ9D7F7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp4cQ9D7F7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Chmp4cQ9D7F7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp4cQ9D7F7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp4cQ9D7F7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.33■□□□□ 0.69
Chmp4cQ9D7F7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp4cQ9D7F7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp4cQ9D7F7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Gm44450-201ENSMUST00000199528 114 ntBASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms