Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc7Q9D541 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Gm11355-201ENSMUST00000121120 306 ntBASIC18.91■□□□□ 0.62
Ccdc7Q9D541 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc7Q9D541 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Gm22697-201ENSMUST00000175194 63 ntBASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Asic1-205ENSMUST00000228185 1818 ntBASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc7Q9D541 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Ccdc7Q9D541 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Ccdc7Q9D541 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc7Q9D541 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc7Q9D541 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc7Q9D541 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc7Q9D541 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms