Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Gm5587-201ENSMUST00000206270 674 ntBASIC17.75■□□□□ 0.43
Cfap53Q9D439 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Mir770-201ENSMUST00000103252 94 ntBASIC17.74■□□□□ 0.43
Cfap53Q9D439 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Gm36967-201ENSMUST00000193814 266 ntBASIC17.74■□□□□ 0.43
Cfap53Q9D439 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap53Q9D439 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.73■□□□□ 0.43
Cfap53Q9D439 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Gm25016-201ENSMUST00000158399 131 ntBASIC17.73■□□□□ 0.43
Cfap53Q9D439 Gm6623-201ENSMUST00000173570 544 ntBASIC17.73■□□□□ 0.43
Cfap53Q9D439 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cfap53Q9D439 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap53Q9D439 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.72■□□□□ 0.43
Cfap53Q9D439 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap53Q9D439 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Cfap53Q9D439 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Gm10052-201ENSMUST00000168019 960 ntBASIC17.71■□□□□ 0.43
Cfap53Q9D439 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Gm23634-201ENSMUST00000175071 91 ntBASIC17.71■□□□□ 0.43
Cfap53Q9D439 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap53Q9D439 Gm7729-201ENSMUST00000050143 801 ntBASIC17.71■□□□□ 0.43
Cfap53Q9D439 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.71■□□□□ 0.43
Cfap53Q9D439 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms