Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Mir6404-201ENSMUST00000183699 94 ntBASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.2■□□□□ 0.66
Stag1Q9D3E6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Gm15590-201ENSMUST00000078419 552 ntBASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag1Q9D3E6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Stag1Q9D3E6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Gm6550-201ENSMUST00000187574 993 ntBASIC19.18■□□□□ 0.66
Stag1Q9D3E6 AV026068-213ENSMUST00000223675 1171 ntBASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stag1Q9D3E6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Gm37935-201ENSMUST00000192012 982 ntBASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Psmb5-202ENSMUST00000227257 622 ntBASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stag1Q9D3E6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Stag1Q9D3E6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stag1Q9D3E6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stag1Q9D3E6 Gm8000-201ENSMUST00000188378 592 ntBASIC19.16■□□□□ 0.66
Stag1Q9D3E6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stag1Q9D3E6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms