Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrc40Q9CRC8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Gm10013-201ENSMUST00000106074 672 ntBASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrc40Q9CRC8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Gm10052-201ENSMUST00000168019 960 ntBASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Gm7729-201ENSMUST00000050143 801 ntBASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrrc40Q9CRC8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Gm44430-201ENSMUST00000203376 995 ntBASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms