Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rer1Q9CQU3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rer1Q9CQU3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rer1Q9CQU3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rer1Q9CQU3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rer1Q9CQU3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Gm11336-201ENSMUST00000118168 334 ntBASIC13.24□□□□□ -0.29
Rer1Q9CQU3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rer1Q9CQU3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Gm13559-201ENSMUST00000120476 863 ntBASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Rer1Q9CQU3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms