Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Gm18195-201ENSMUST00000207604 706 ntBASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.29■□□□□ 0.2
Lsm7Q9CQQ8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm7Q9CQQ8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Gm6376-201ENSMUST00000209407 580 ntBASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm7Q9CQQ8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm7Q9CQQ8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm7Q9CQQ8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm7Q9CQQ8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm7Q9CQQ8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm7Q9CQQ8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm7Q9CQQ8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.27■□□□□ 0.19
Lsm7Q9CQQ8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Lsm7Q9CQQ8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm7Q9CQQ8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Gm9172-201ENSMUST00000212092 954 ntBASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms