Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Gm23935-201ENSMUST00000102303 57 ntBASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Gm24270-201ENSMUST00000102326 57 ntBASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Gm24245-201ENSMUST00000157318 57 ntBASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf8Q99PV0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Gm4535-201ENSMUST00000182274 558 ntBASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Gm10355-201ENSMUST00000097146 517 ntBASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf8Q99PV0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Gm25990-201ENSMUST00000102440 86 ntBASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Gm11779-201ENSMUST00000118541 368 ntBASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Gm8000-201ENSMUST00000188378 592 ntBASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Gm2213-201ENSMUST00000197485 688 ntBASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Gm9172-201ENSMUST00000212092 954 ntBASIC13.21□□□□□ -0.3
Prpf8Q99PV0 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf8Q99PV0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.2□□□□□ -0.3
Prpf8Q99PV0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf8Q99PV0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Gm14140-201ENSMUST00000119999 995 ntBASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Gm25406-201ENSMUST00000157599 105 ntBASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms