Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm8825-201ENSMUST00000182565 998 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm4518-201ENSMUST00000182638 718 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Gm2756-201ENSMUST00000195851 400 ntBASIC19.88■□□□□ 0.77
Trim34aQ99PP6 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34aQ99PP6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34aQ99PP6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34aQ99PP6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34aQ99PP6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim34aQ99PP6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34aQ99PP6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34aQ99PP6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim34aQ99PP6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34aQ99PP6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34aQ99PP6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34aQ99PP6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms