Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Gm16198-201ENSMUST00000118766 670 ntBASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Gm7774-201ENSMUST00000200064 533 ntBASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Gm2423-201ENSMUST00000074863 733 ntBASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh15Q99PJ1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Mir6977-201ENSMUST00000184960 64 ntBASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh15Q99PJ1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh15Q99PJ1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdh15Q99PJ1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Pcdh15Q99PJ1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Gm19164-201ENSMUST00000210667 640 ntBASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh15Q99PJ1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Gm15693-201ENSMUST00000120470 637 ntBASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Gm10253-201ENSMUST00000194270 940 ntBASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh15Q99PJ1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms